RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 CCL23P55773 120 aa21.85■■□□□ 1.09
COMMD1-207ENST00000471704 NBPF20Q3BBV1 942 aa21.85■■□□□ 1.09
COMMD1-207ENST00000471704 NFRKBQ6P4R8 1299 aa21.85■■□□□ 1.09
COMMD1-207ENST00000471704 CATIPQ7Z7H3 387 aa21.85■■□□□ 1.09
COMMD1-207ENST00000471704 RMDN3Q96TC7 470 aa21.85■■□□□ 1.09
COMMD1-207ENST00000471704 MTA3Q9BTC8 594 aa21.85■■□□□ 1.09
COMMD1-207ENST00000471704 GBF1Q92538 1859 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 CDC45O75419 566 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 FOSL2P15408 326 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 MAP3K14Q99558 947 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 LRRC2Q9BYS8 371 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 PCDHA1Q9Y5I3 950 aa21.84■■□□□ 1.09
COMMD1-207ENST00000471704 DDAH1O94760 285 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 CYP2C9P11712 490 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 EIF2AK2P19525 551 aaKnown RBP21.83■■□□□ 1.09
COMMD1-207ENST00000471704 PTPN11Q06124 597 aaPredicted RBP21.83■■□□□ 1.09
COMMD1-207ENST00000471704 ARHGAP1Q07960 439 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 STXBP2Q15833 593 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 RPUSD2Q8IZ73 545 aaKnown RBP21.83■■□□□ 1.09
COMMD1-207ENST00000471704 TMEM87BQ96K49 555 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 PXMP2Q9NR77 195 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 SCN5AQ14524 2016 aa21.83■■□□□ 1.09
COMMD1-207ENST00000471704 PNMA6FA0A0J9YX94 578 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 RXRAP19793 462 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 LY6KQ17RY6 165 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 SEPT14Q6ZU15 432 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 OTOP2Q7RTS6 562 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 RASEFQ8IZ41 740 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 AFG1LQ8WV93 481 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 SCLYQ96I15 445 aa21.82■■□□□ 1.08
COMMD1-207ENST00000471704 MTIF3Q9H2K0 278 aaKnown RBP21.82■■□□□ 1.08
COMMD1-207ENST00000471704 DOCK5Q9H7D0 1870 aa21.81■■□□□ 1.08
COMMD1-207ENST00000471704 EIF3JO75822 258 aaKnown RBP21.81■■□□□ 1.08
COMMD1-207ENST00000471704 PLEKHA8P1O95397 391 aa21.81■■□□□ 1.08
COMMD1-207ENST00000471704 HOXA13P31271 388 aaPredicted RBP21.81■■□□□ 1.08
COMMD1-207ENST00000471704 LIFRP42702 1097 aa21.81■■□□□ 1.08
COMMD1-207ENST00000471704 RAB11FIP4Q86YS3 637 aa21.81■■□□□ 1.08
COMMD1-207ENST00000471704 PIBF1Q8WXW3 757 aa21.81■■□□□ 1.08
COMMD1-207ENST00000471704 SPZ1Q9BXG8 430 aa21.81■■□□□ 1.08
COMMD1-207ENST00000471704 MAP3K20Q9NYL2 800 aaKnown RBP21.81■■□□□ 1.08
COMMD1-207ENST00000471704 DDX41Q9UJV9 622 aaKnown RBP21.81■■□□□ 1.08
COMMD1-207ENST00000471704 TRIP12Q14669 1992 aaPredicted RBP21.81■■□□□ 1.08
COMMD1-207ENST00000471704 GH1P01241 217 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 NR3C2P08235 984 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 ADCK5Q3MIX3 580 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 FAM47CQ5HY64 1035 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 ARHGEF16Q5VV41 709 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
COMMD1-207ENST00000471704 SRBD1Q8N5C6 995 aaKnown RBP21.8■■□□□ 1.08
COMMD1-207ENST00000471704 SAMD3Q8N6K7 520 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 IL31RAQ8NI17 732 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 PPP1R13LQ8WUF5 828 aa21.8■■□□□ 1.08
COMMD1-207ENST00000471704 EMID1Q96A84 441 aaPredicted RBP21.8■■□□□ 1.08
COMMD1-207ENST00000471704 COL25A1Q9BXS0 654 aaPredicted RBP21.8■■□□□ 1.08
COMMD1-207ENST00000471704 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 PITPNM1O00562 1244 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 RGS20O76081 388 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 PFKMP08237 780 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 MMP3P08254 477 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 RAB30Q15771 203 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
COMMD1-207ENST00000471704 KAT2BQ92831 832 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 PDCD2LQ9BRP1 358 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 MSRAQ9UJ68 235 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 TET1Q8NFU7 2136 aa21.79■■□□□ 1.08
COMMD1-207ENST00000471704 EXOSC10Q01780 885 aaKnown RBP21.78■■□□□ 1.08
COMMD1-207ENST00000471704 TSGA10IPQ3SY00 556 aa21.78■■□□□ 1.08
COMMD1-207ENST00000471704 SESTD1Q86VW0 696 aa21.78■■□□□ 1.08
COMMD1-207ENST00000471704 TMTC2Q8N394 836 aa21.78■■□□□ 1.08
COMMD1-207ENST00000471704 TCEANC2Q96MN5 208 aa21.78■■□□□ 1.08
COMMD1-207ENST00000471704 CTAGE1Q96RT6 745 aa21.78■■□□□ 1.08
COMMD1-207ENST00000471704 YBX2Q9Y2T7 364 aaKnown RBP21.78■■□□□ 1.08
COMMD1-207ENST00000471704 SLC4A7Q9Y6M7 1214 aa21.78■■□□□ 1.08
COMMD1-207ENST00000471704 TANC1Q9C0D5 1861 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 SMARCA1P28370 1054 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 RFC2P35250 354 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 PGM5Q15124 567 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 RNF20Q5VTR2 975 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 VSIG10LQ86VR7 867 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 SGMS1Q86VZ5 419 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 NEK1Q96PY6 1258 aa21.77■■□□□ 1.08
COMMD1-207ENST00000471704 TRANK1O15050 2925 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 GCOM1H8Y6P7 765 aaPredicted RBP21.76■■□□□ 1.07
COMMD1-207ENST00000471704 IQCF3P0C7M6 154 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 POLR2MP0CAP2 368 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 CASTP20810 708 aaKnown RBP21.76■■□□□ 1.07
COMMD1-207ENST00000471704 KIF5BP33176 963 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 LAMC2Q13753 1193 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 TTC28Q96AY4 2481 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 ZFP91Q96JP5 570 aaPredicted RBP21.76■■□□□ 1.07
COMMD1-207ENST00000471704 FRMPD4Q14CM0 1322 aa21.76■■□□□ 1.07
COMMD1-207ENST00000471704 MYCLP12524 364 aaPredicted RBP21.75■■□□□ 1.07
COMMD1-207ENST00000471704 HOXD8P13378 290 aaPredicted RBP21.75■■□□□ 1.07
COMMD1-207ENST00000471704 TRAF1Q13077 416 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 BFSP2Q13515 415 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 DGKDQ16760 1214 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 DEFB128Q7Z7B8 93 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 FCHSD1Q86WN1 690 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms