RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
PRPF40A-207ENST00000471701 NGRNQ9NPE2 291 aaKnown RBP5.7□□□□□ -1.5
PRPF40A-207ENST00000471701 SPATA6Q9NWH7 488 aaPredicted RBP5.7□□□□□ -1.5
PRPF40A-207ENST00000471701 UNCXA6NJT0 531 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 K7ESM1 405 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 MEFVO15553 781 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 NOBOXO60393 691 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 ERCC5P28715 1186 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 DLX2Q07687 328 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 FXNQ16595 210 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 MBLAC2Q68D91 279 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 C6orf15Q6UXA7 325 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 LINC00482Q8N8I6 264 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 KYQ8NBH2 561 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 TMEM169Q96HH4 297 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 YIPF4Q9BSR8 244 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 C11orf84Q9BUA3 381 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 CNOT11Q9UKZ1 510 aaKnown RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 PALD1Q9ULE6 856 aa5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-207ENST00000471701 ITGAVP06756 1048 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 BCL6P41182 706 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 SLC6A11P48066 632 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 FAM124AQ86V42 546 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 TTLL6Q8N841 843 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 NPLOC4Q8TAT6 608 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 BTN2A2Q8WVV5 523 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 GORASP1Q9BQQ3 440 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 R3HCC1Q9Y3T6 440 aaKnown RBP5.68□□□□□ -1.5
PRPF40A-207ENST00000471701 C8BP07358 591 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 CNR2P34972 360 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 KCNAB2Q13303 367 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 CHRNA2Q15822 529 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 ZNF761Q86XN6 746 aaPredicted RBP5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 RIOX2Q8IUF8 465 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 ADAMTS17Q8TE56 1095 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 GPR20Q99678 358 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 LNPKQ9C0E8 428 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 PRKAG3Q9UGI9 489 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 X6R8D5 127 aa5.67□□□□□ -1.5
PRPF40A-207ENST00000471701 AGRPO00253 132 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 SUSD5O60279 629 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 FPR2P25090 351 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 RPL13P26373 211 aaKnown RBP5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 NKX3-2P78367 333 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 LSAMPQ13449 338 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 ZNF827Q17R98 1081 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 ZXDCQ2QGD7 858 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 RGL3Q3MIN7 710 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 STK32CQ86UX6 486 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 MIB1Q86YT6 1006 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 FAM26EQ8N5C1 309 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 TMEFF2Q9UIK5 374 aaPredicted RBP5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 DUSP10Q9Y6W6 482 aa5.66□□□□□ -1.5
PRPF40A-207ENST00000471701 HGSO14964 777 aaPredicted RBP5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 SCG5P05408 212 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 THBS2P35442 1172 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 LTBRP36941 435 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 ETFBP38117 255 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 MCTP2Q6DN12 878 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 ZNF227Q86WZ6 799 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 FAM126BQ8IXS8 530 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 PPIL6Q8IXY8 311 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 RCBTB1Q8NDN9 531 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 PCDHA2Q9Y5H9 948 aa5.65□□□□□ -1.5
PRPF40A-207ENST00000471701 MROH6A6NGR9 719 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 H7BY64 318 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 DDX3XO00571 662 aaKnown RBP eCLIP5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 TBX1O43435 398 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 STAT5AP42229 794 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 NFKB2Q00653 900 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 CYP4F3Q08477 520 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 SF1Q15637 639 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 ACBD5Q5T8D3 534 aaPredicted RBP5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 EEPD1Q7L9B9 569 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 GGNQ86UU5 652 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 CCDC103Q8IW40 242 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 LGI4Q8N135 537 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 KREMEN2Q8NCW0 462 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 TOE1Q96GM8 510 aaKnown RBP5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 EPN3Q9H201 632 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 CLDND1Q9NY35 253 aa5.64□□□□□ -1.51
PRPF40A-207ENST00000471701 B2RBV5 119 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 ARNTLO00327 626 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 DGKIO75912 1065 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 INSRRP14616 1297 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 ARID5AQ03989 594 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 PRSS53Q2L4Q9 553 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 FAM26FQ5R3K3 315 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 PRAMEF18Q5VWM3 479 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 STEAP3Q658P3 488 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 HHIPL2Q6UWX4 724 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 ZNF536O15090 1300 aa5.63□□□□□ -1.51
PRPF40A-207ENST00000471701 MAFKO60675 156 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms