RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 RGS20O76081 388 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 TGFB3P10600 412 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 HOXA13P31271 388 aaPredicted RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 NBPF20Q3BBV1 942 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 PSRC1Q6PGN9 363 aaPredicted RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 AFG1LQ8WV93 481 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
VPS8-221ENST00000471655 BAZ2BQ9UIF8 2168 aaKnown RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 LAMA2P24043 3122 aaKnown RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 FRMPD4Q14CM0 1322 aa17.31■□□□□ 0.36
VPS8-221ENST00000471655 TMEM265A0A087WTH1 108 aa17.31■□□□□ 0.36
VPS8-221ENST00000471655 MMP3P08254 477 aa17.31■□□□□ 0.36
VPS8-221ENST00000471655 LAMC2Q13753 1193 aa17.31■□□□□ 0.36
VPS8-221ENST00000471655 COL9A3Q14050 684 aaPredicted RBP17.31■□□□□ 0.36
VPS8-221ENST00000471655 MYL10Q9BUA6 226 aa17.31■□□□□ 0.36
VPS8-221ENST00000471655 MRVI1Q9Y6F6 885 aa17.31■□□□□ 0.36
VPS8-221ENST00000471655 UMODL1Q5DID0 1318 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 PIK3CDO00329 1044 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 STAM2O75886 525 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 MYCLP12524 364 aaPredicted RBP17.3■□□□□ 0.36
VPS8-221ENST00000471655 CASTP20810 708 aaKnown RBP17.3■□□□□ 0.36
VPS8-221ENST00000471655 CCND2P30279 289 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 DGKDQ16760 1214 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 ZNF365Q70YC5 407 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 SESTD1Q86VW0 696 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
VPS8-221ENST00000471655 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 PPTC7Q8NI37 304 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 CCDC136Q96JN2 1154 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 WNT8AQ9H1J5 351 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 TRMT13Q9NUP7 481 aaKnown RBP17.3■□□□□ 0.36
VPS8-221ENST00000471655 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
VPS8-221ENST00000471655 SLC12A7Q9Y666 1083 aa17.3■□□□□ 0.36
VPS8-221ENST00000471655 PLEKHA8P1O95397 391 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 FGBP02675 491 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
VPS8-221ENST00000471655 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
VPS8-221ENST00000471655 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
VPS8-221ENST00000471655 RPUSD2Q8IZ73 545 aaKnown RBP17.29■□□□□ 0.36
VPS8-221ENST00000471655 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 HERVK_113Q902F9 699 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 KAT2BQ92831 832 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 GUCD1Q96NT3 240 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
VPS8-221ENST00000471655 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 PPFIA4O75335 1185 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 PFKMP08237 780 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 ACRP10323 421 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 CCL23P55773 120 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 KRT32Q14532 448 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 CELF3Q5SZQ8 465 aaKnown RBP17.28■□□□□ 0.36
VPS8-221ENST00000471655 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 XRRA1Q6P2D8 792 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 DHX32Q7L7V1 743 aaKnown RBP17.28■□□□□ 0.36
VPS8-221ENST00000471655 PIBF1Q8WXW3 757 aa17.28■□□□□ 0.36
VPS8-221ENST00000471655 MTIF3Q9H2K0 278 aaKnown RBP17.28■□□□□ 0.36
VPS8-221ENST00000471655 MEIS2O14770 477 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.36
VPS8-221ENST00000471655 CYP2C9P11712 490 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 ICAM3P32942 547 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 FAM47CQ5HY64 1035 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 SYNE3Q6ZMZ3 975 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 RASEFQ8IZ41 740 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 KCNB2Q92953 911 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 CUL5Q93034 780 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
VPS8-221ENST00000471655 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 LRRC2Q9BYS8 371 aa17.27■□□□□ 0.36
VPS8-221ENST00000471655 HAS3O00219 553 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 F2P00734 622 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 RXRAP19793 462 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 RFC2P35250 354 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 MRPS9P82933 396 aaKnown RBP17.26■□□□□ 0.35
VPS8-221ENST00000471655 SP2Q02086 613 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 GNPTABQ3T906 1256 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 TEX2Q8IWB9 1127 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 VWCEQ96DN2 955 aa17.26■□□□□ 0.35
VPS8-221ENST00000471655 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
VPS8-221ENST00000471655 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
VPS8-221ENST00000471655 SPATA31C2B4DYI2 1134 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 GGPS1O95749 300 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
VPS8-221ENST00000471655 RCAN1P53805 252 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 BFSP2Q13515 415 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 PTGISQ16647 500 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 PCNX4Q63HM2 1172 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
VPS8-221ENST00000471655 FAM161BQ96MY7 647 aa17.25■□□□□ 0.35
VPS8-221ENST00000471655 SPATA33Q96N06 139 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms