RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 NOX5Q96PH1 765 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 SPATA25Q9BR10 227 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.31□□□□□ -1.4
RBM39-228ENST00000471635 SMPD4Q9NXE4 827 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 SUSD5O60279 629 aa6.3□□□□□ -1.4
RBM39-228ENST00000471635 SNRPB2P08579 225 aaKnown RBP6.3□□□□□ -1.4
RBM39-228ENST00000471635 ECI1P42126 302 aa6.3□□□□□ -1.4
RBM39-228ENST00000471635 CACNB2Q08289 660 aaPredicted RBP6.3□□□□□ -1.4
RBM39-228ENST00000471635 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
RBM39-228ENST00000471635 ZNF227Q86WZ6 799 aa6.3□□□□□ -1.4
RBM39-228ENST00000471635 DCP2Q8IU60 420 aaKnown RBP6.3□□□□□ -1.4
RBM39-228ENST00000471635 NPLOC4Q8TAT6 608 aa6.3□□□□□ -1.4
RBM39-228ENST00000471635 SLITRK6Q9H5Y7 841 aa6.3□□□□□ -1.4
RBM39-228ENST00000471635 PRKAG3Q9UGI9 489 aa6.3□□□□□ -1.4
RBM39-228ENST00000471635 C22orf46C9J442 243 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 FPR2P25090 351 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
RBM39-228ENST00000471635 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 CPA5Q8WXQ8 436 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 ZNF428Q96B54 188 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 DDX11Q96FC9 970 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 AP5M1Q9H0R1 490 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 USP40Q9NVE5 1235 aa6.29□□□□□ -1.4
RBM39-228ENST00000471635 TMEFF2Q9UIK5 374 aaPredicted RBP6.29□□□□□ -1.4
RBM39-228ENST00000471635 CCDC9Q9Y3X0 531 aaKnown RBP6.29□□□□□ -1.4
RBM39-228ENST00000471635 MEFVO15553 781 aaPredicted RBP6.28□□□□□ -1.4
RBM39-228ENST00000471635 GDF5P43026 501 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 KCNJ6P48051 423 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
RBM39-228ENST00000471635 RBM10P98175 930 aaKnown RBP6.28□□□□□ -1.4
RBM39-228ENST00000471635 DLX2Q07687 328 aaPredicted RBP6.28□□□□□ -1.4
RBM39-228ENST00000471635 SF1Q15637 639 aaKnown RBP6.28□□□□□ -1.4
RBM39-228ENST00000471635 FXNQ16595 210 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 PRSS53Q2L4Q9 553 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 NT5DC1Q5TFE4 455 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 DIO2Q92813 273 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 ZBTB8AQ96BR9 441 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 ZNF408Q9H9D4 720 aa6.28□□□□□ -1.4
RBM39-228ENST00000471635 SH3D21A4FU49 640 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 SGSM2O43147 1006 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 C8BP07358 591 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 FGRP09769 529 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 CYP2C8P10632 490 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 HOXC12P31275 282 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 BCL6P41182 706 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 SMAD4Q13485 552 aaKnown RBP6.27□□□□□ -1.41
RBM39-228ENST00000471635 E4F1Q66K89 784 aaPredicted RBP6.27□□□□□ -1.41
RBM39-228ENST00000471635 IQCEQ6IPM2 695 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 CARFQ8N187 725 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 SYT3Q9BQG1 590 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 MRIQ9BWK5 157 aa6.27□□□□□ -1.41
RBM39-228ENST00000471635 TIMM13Q9Y5L4 95 aaPredicted RBP6.27□□□□□ -1.41
RBM39-228ENST00000471635 ARNTLO00327 626 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 GJB6O95452 261 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 DNAJA1P31689 397 aaKnown RBP6.26□□□□□ -1.41
RBM39-228ENST00000471635 ARID5AQ03989 594 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 KCNAB2Q13303 367 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 CPZQ66K79 652 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 ETV3LQ6ZN32 361 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 CEP68Q76N32 757 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 NLRP10Q86W26 655 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 PPIL6Q8IXY8 311 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 FAM26EQ8N5C1 309 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 SEC14L1Q92503 715 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 TRMT2BQ96GJ1 504 aaKnown RBP6.26□□□□□ -1.41
RBM39-228ENST00000471635 TINF2Q9BSI4 451 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
RBM39-228ENST00000471635 SPATA6Q9NWH7 488 aaPredicted RBP6.26□□□□□ -1.41
RBM39-228ENST00000471635 FBXL7Q9UJT9 491 aa6.26□□□□□ -1.41
RBM39-228ENST00000471635 MYO1BO43795 1136 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 SMARCA5O60264 1052 aaPredicted RBP6.25□□□□□ -1.41
RBM39-228ENST00000471635 CPP00450 1065 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 SCG5P05408 212 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 C6P13671 934 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 MROH9Q5TGP6 573 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 CD300LDQ6UXZ3 194 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 MILR1Q7Z6M3 343 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 MCF2L2Q86YR7 1114 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 HNRNPLLQ8WVV9 542 aaKnown RBP6.25□□□□□ -1.41
RBM39-228ENST00000471635 TMEM169Q96HH4 297 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 CHAMP1Q96JM3 812 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 GORASP1Q9BQQ3 440 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 C1QTNF3Q9BXJ4 246 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 NTMQ9P121 344 aa6.25□□□□□ -1.41
RBM39-228ENST00000471635 R3HCC1Q9Y3T6 440 aaKnown RBP6.25□□□□□ -1.41
RBM39-228ENST00000471635 CYR61O00622 381 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 LCP1P13796 627 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 TACR2P21452 398 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 SLC6A11P48066 632 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 SARSP49591 514 aaKnown RBP6.24□□□□□ -1.41
RBM39-228ENST00000471635 GFRA1P56159 465 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 TTLL7Q6ZT98 887 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 STK32CQ86UX6 486 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 FERMT3Q86UX7 667 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 TMEM145Q8NBT3 493 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 RCBTB1Q8NDN9 531 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 ST7Q9NRC1 585 aa6.24□□□□□ -1.41
RBM39-228ENST00000471635 PCDHA2Q9Y5H9 948 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms