RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
CHKB-206ENST00000471515 DDX41Q9UJV9 622 aaKnown RBP10.16□□□□□ -0.78
CHKB-206ENST00000471515 MRPL11Q9Y3B7 192 aaKnown RBP10.16□□□□□ -0.78
CHKB-206ENST00000471515 XIRP2A4UGR9 3374 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 MYH6P13533 1939 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 E7EWF7 191 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 EIF3JO75822 258 aaKnown RBP10.15□□□□□ -0.78
CHKB-206ENST00000471515 FGBP02675 491 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 NR3C2P08235 984 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 PFKMP08237 780 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 MYL3P08590 195 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 SUPT20HL2P0C7V6 817 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 FOSL2P15408 326 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 HOXC8P31273 242 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 HIC1Q14526 733 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 STXBP2Q15833 593 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 TRIM71Q2Q1W2 868 aaKnown RBP10.15□□□□□ -0.78
CHKB-206ENST00000471515 OTOP2Q7RTS6 562 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 VSIG10LQ86VR7 867 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 MCF2L2Q86YR7 1114 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 AMNQ9BXJ7 453 aa10.15□□□□□ -0.78
CHKB-206ENST00000471515 GPHNQ9NQX3 736 aaPredicted RBP10.15□□□□□ -0.78
CHKB-206ENST00000471515 BAZ2BQ9UIF8 2168 aaKnown RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 PTPRSQ13332 1948 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 ARHGEF15O94989 841 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 F2P00734 622 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 GH1P01241 217 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 IQCF3P0C7M6 154 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 MYOGP15173 224 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 EIF2AK2P19525 551 aaKnown RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 SP2Q02086 613 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 TCTN1Q2MV58 587 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 GDF6Q6KF10 455 aaPredicted RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 SEPT14Q6ZU15 432 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 SAMD3Q8N6K7 520 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 PPTC7Q8NI37 304 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 WNT8BQ93098 351 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 LSG1Q9H089 658 aaKnown RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 LY9Q9HBG7 655 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 VAT1LQ9HCJ6 419 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 MAP3K20Q9NYL2 800 aaKnown RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 PCDHA1Q9Y5I3 950 aa10.14□□□□□ -0.79
CHKB-206ENST00000471515 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
CHKB-206ENST00000471515 B4DLN1 442 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 CFBP00751 764 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 HOXA13P31271 388 aaPredicted RBP10.13□□□□□ -0.79
CHKB-206ENST00000471515 MRPL12P52815 198 aaKnown RBP10.13□□□□□ -0.79
CHKB-206ENST00000471515 RABGGTBP53611 331 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 SEMA3FQ13275 785 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 PGM5Q15124 567 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 RAB30Q15771 203 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 CHST3Q7LGC8 479 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 GPKOWQ92917 476 aaPredicted RBP eCLIP10.13□□□□□ -0.79
CHKB-206ENST00000471515 PIGSQ96S52 555 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 MPHOSPH6Q99547 160 aaKnown RBP10.13□□□□□ -0.79
CHKB-206ENST00000471515 MAP3K14Q99558 947 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 C16orf70Q9BSU1 422 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 NKX2-4Q9H2Z4 354 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 PRDM12Q9H4Q4 367 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 BCAS3Q9H6U6 928 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 GTF2IRD1Q9UHL9 959 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 PCDHA11Q9Y5I1 949 aa10.13□□□□□ -0.79
CHKB-206ENST00000471515 RBM8AQ9Y5S9 174 aaKnown RBP10.13□□□□□ -0.79
CHKB-206ENST00000471515 MYO9BQ13459 2157 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 PNMA6FA0A0J9YX94 578 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 CXCL10P02778 98 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 ATP2A2P16615 1042 aaKnown RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 UBA1P22314 1058 aaKnown RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 RFC2P35250 354 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 MRPS9P82933 396 aaKnown RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 MBTPS1Q14703 1052 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 HSDL1Q3SXM5 330 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 BRDTQ58F21 947 aaPredicted RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 CELF3Q5SZQ8 465 aaKnown RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 ARHGEF16Q5VV41 709 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 INPP4AQ96PE3 977 aaPredicted RBP10.12□□□□□ -0.79
CHKB-206ENST00000471515 MTA3Q9BTC8 594 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 SPZ1Q9BXG8 430 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 PRDM6Q9NQX0 595 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 HDAC6Q9UBN7 1215 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 TELO2Q9Y4R8 837 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 SLC4A7Q9Y6M7 1214 aa10.12□□□□□ -0.79
CHKB-206ENST00000471515 MEIS2O14770 477 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 NBNO60934 754 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 ZNF286BP0CG31 522 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 TGFB3P10600 412 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 POU3F3P20264 500 aaPredicted RBP10.11□□□□□ -0.79
CHKB-206ENST00000471515 ICAM3P32942 547 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 PSEN2P49810 448 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 LAMC2Q13753 1193 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 WTAPQ15007 396 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
CHKB-206ENST00000471515 PTGISQ16647 500 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms