RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TMEM260Q9NX78 707 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 PCDHA6Q9UN73 950 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 PCDHA8Q9Y5H6 950 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 PDE4DIPQ5VU43 2346 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 SPDYE3A6NKU9 549 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 KBTBD13C9JR72 458 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 ST18O60284 1047 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 RGS20O76081 388 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 ARIH2O95376 493 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 MYCNP04198 464 aaPredicted RBP22.65■■□□□ 1.22
HDAC7-220ENST00000471235 COL6A1P12109 1028 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 GJA9P57773 515 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 IRX5P78411 483 aaPredicted RBP22.65■■□□□ 1.22
HDAC7-220ENST00000471235 MRPS9P82933 396 aaKnown RBP22.65■■□□□ 1.22
HDAC7-220ENST00000471235 MLLT1Q03111 559 aaPredicted RBP22.65■■□□□ 1.22
HDAC7-220ENST00000471235 DUSP28Q4G0W2 176 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 SEPT14Q6ZU15 432 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 NECAB2Q7Z6G3 386 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 ZFP91Q96JP5 570 aaPredicted RBP22.65■■□□□ 1.22
HDAC7-220ENST00000471235 PGBD1Q96JS3 809 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 C11orf49Q9H6J7 331 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 C6orf50Q9HD87 102 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 SH3GLB2Q9NR46 395 aa22.65■■□□□ 1.22
HDAC7-220ENST00000471235 TTLL4Q14679 1199 aa22.64■■□□□ 1.21
HDAC7-220ENST00000471235 PCNX4Q63HM2 1172 aa22.64■■□□□ 1.21
HDAC7-220ENST00000471235 RNF180Q86T96 592 aa22.64■■□□□ 1.21
HDAC7-220ENST00000471235 CCDC83Q8IWF9 413 aa22.64■■□□□ 1.21
HDAC7-220ENST00000471235 KLHDC9Q8NEP7 349 aa22.64■■□□□ 1.21
HDAC7-220ENST00000471235 ZSCAN31Q96LW9 406 aaPredicted RBP22.64■■□□□ 1.21
HDAC7-220ENST00000471235 ANO3Q9BYT9 981 aa22.64■■□□□ 1.21
HDAC7-220ENST00000471235 CTAGE5O15320 804 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 JAK2O60674 1132 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 CD2BP2O95400 341 aaKnown RBP22.63■■□□□ 1.21
HDAC7-220ENST00000471235 C6orf222P0C671 652 aaPredicted RBP22.63■■□□□ 1.21
HDAC7-220ENST00000471235 CST5P28325 142 aaPredicted RBP22.63■■□□□ 1.21
HDAC7-220ENST00000471235 NKX3-2P78367 333 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 AP3B2Q13367 1082 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 CCDC62Q6P9F0 684 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 COPS5Q92905 334 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 EHMT1Q9H9B1 1298 aa22.63■■□□□ 1.21
HDAC7-220ENST00000471235 SH2B1Q9NRF2 756 aaPredicted RBP22.63■■□□□ 1.21
HDAC7-220ENST00000471235 ORC3Q9UBD5 711 aaPredicted RBP22.63■■□□□ 1.21
HDAC7-220ENST00000471235 SCN10AQ9Y5Y9 1956 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 FOSP01100 380 aaPredicted RBP22.62■■□□□ 1.21
HDAC7-220ENST00000471235 TXNP10599 105 aaKnown RBP22.62■■□□□ 1.21
HDAC7-220ENST00000471235 FDPSP14324 419 aaKnown RBP22.62■■□□□ 1.21
HDAC7-220ENST00000471235 GNA11P29992 359 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 JAKMIP3Q5VZ66 844 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 REXO1Q8N1G1 1221 aaKnown RBP22.62■■□□□ 1.21
HDAC7-220ENST00000471235 IL27Q8NEV9 243 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 SPC25Q9HBM1 224 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 PHF24Q9UPV7 400 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 Q9Y3F1 56 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 WDR81Q562E7 1941 aa22.62■■□□□ 1.21
HDAC7-220ENST00000471235 NKRFO15226 690 aaKnown RBP eCLIP22.61■■□□□ 1.21
HDAC7-220ENST00000471235 DYNC1LI2O43237 492 aaPredicted RBP22.61■■□□□ 1.21
HDAC7-220ENST00000471235 STAM2O75886 525 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 NLRP5P59047 1200 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 CCSAPQ6IQ19 270 aaPredicted RBP22.61■■□□□ 1.21
HDAC7-220ENST00000471235 XRRA1Q6P2D8 792 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 FAM177A1Q8N128 213 aaPredicted RBP22.61■■□□□ 1.21
HDAC7-220ENST00000471235 OR6J1Q8NGC5 347 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 RASGRP4Q8TDF6 673 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 INPP4AQ96PE3 977 aaPredicted RBP22.61■■□□□ 1.21
HDAC7-220ENST00000471235 AP5M1Q9H0R1 490 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 MRVI1Q9Y6F6 885 aa22.61■■□□□ 1.21
HDAC7-220ENST00000471235 BEX3Q00994 111 aa22.6■■□□□ 1.21
HDAC7-220ENST00000471235 LY6KQ17RY6 165 aa22.6■■□□□ 1.21
HDAC7-220ENST00000471235 BICD2Q8TD16 824 aa22.6■■□□□ 1.21
HDAC7-220ENST00000471235 TSEN34Q9BSV6 310 aaKnown RBP22.6■■□□□ 1.21
HDAC7-220ENST00000471235 SREBF1P36956 1147 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 ARHGAP1Q07960 439 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 SEMA3FQ13275 785 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 NPY5RQ15761 445 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 KCNA10Q16322 511 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 FSCN1Q16658 493 aaKnown RBP22.59■■□□□ 1.21
HDAC7-220ENST00000471235 GNPTABQ3T906 1256 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 DAGLBQ8NCG7 672 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 WASF1Q92558 559 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 ALG1Q9BT22 464 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 SENP6Q9GZR1 1112 aaPredicted RBP22.59■■□□□ 1.21
HDAC7-220ENST00000471235 RTEL1Q9NZ71 1219 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 DDX41Q9UJV9 622 aaKnown RBP22.59■■□□□ 1.21
HDAC7-220ENST00000471235 PCDHA4Q9UN74 947 aa22.59■■□□□ 1.21
HDAC7-220ENST00000471235 A0A1W2PQ45 241 aaPredicted RBP22.58■■□□□ 1.21
HDAC7-220ENST00000471235 A0A1W2PQY0 241 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 MOXD2PA6NHM9 499 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 ICAM3P32942 547 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 ACLYP53396 1101 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 GNASQ5JWF2 1037 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 MCTP2Q6DN12 878 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 PCSK9Q8NBP7 692 aaKnown RBP22.58■■□□□ 1.21
HDAC7-220ENST00000471235 FERMT2Q96AC1 680 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 LLPHQ9BRT6 129 aaKnown RBP22.58■■□□□ 1.21
HDAC7-220ENST00000471235 HTATIP2Q9BUP3 242 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 PHF20Q9BVI0 1012 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 GJB4Q9NTQ9 266 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 KCNJ14Q9UNX9 436 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 UBIAD1Q9Y5Z9 338 aa22.58■■□□□ 1.21
HDAC7-220ENST00000471235 LTBP2Q14767 1821 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms