RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 UNC13DQ70J99 1090 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.52□□□□□ -0.57
RRP1B-202ENST00000470886 ZBTB9Q96C00 473 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 MXD3Q9BW11 206 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 GRID2IPA4D2P6 1211 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 PRKAB2O43741 272 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 SH3BGRP55822 239 aaPredicted RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 SNX16P57768 344 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 NNTQ13423 1086 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 BIRC3Q13489 604 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 KRT26Q7Z3Y9 468 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 LARSQ9P2J5 1176 aaKnown RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 NEDD4P46934 1319 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 TMC4Q7Z404 712 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 METTL16Q86W50 562 aaKnown RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 PAF1Q8N7H5 531 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■□□ 14.8
RRP1B-202ENST00000470886 MAK16Q9BXY0 300 aaKnown RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 PLCG1P19174 1290 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 PCK1P35558 622 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 LMNB2Q03252 620 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 PLS1Q14651 629 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 AOC3Q16853 763 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
RRP1B-202ENST00000470886 FBXO2Q9UK22 296 aaPredicted RBP11.51□□□□□ -0.57
RRP1B-202ENST00000470886 TOM1O60784 492 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 SUN1O94901 812 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 C2orf54Q08AI8 447 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 STRN3Q13033 797 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 SLMAPQ14BN4 828 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 HNRNPLLQ8WVV9 542 aaKnown RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 RABEP2Q9H5N1 569 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 TXNDC16Q9P2K2 825 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 BAIAP2L1Q9UHR4 511 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 DAAM1Q9Y4D1 1078 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 MEGF6O75095 1541 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 GAS7O60861 476 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 LUC7L3O95232 432 aaKnown RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 TROVE2P10155 538 aaKnown RBP eCLIP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 NR1D1P20393 614 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 NR2F2P24468 414 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 NEDD9Q14511 834 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 MFSD14BQ5SR56 506 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 CEP72Q9P209 647 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 ASAP1Q9ULH1 1129 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 XDHP47989 1333 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 MST1RQ04912 1400 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 KIF28PB7ZC32 967 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 CHMP2AO43633 222 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 CDC27P30260 824 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 PSMC2P35998 433 aaKnown RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 BTDP43251 543 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 EIF6P56537 245 aaKnown RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 TBCKQ8TEA7 893 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 PHBP35232 272 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 CLEC4GQ6UXB4 293 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 TRMT1LQ7Z2T5 733 aaKnown RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 APBB1IPQ7Z5R6 666 aaPredicted RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 FAM178BQ8IXR5 827 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 BSDC1Q9NW68 430 aaPredicted RBP11.5□□□□□ -0.57
RRP1B-202ENST00000470886 CAPN11Q9UMQ6 739 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
RRP1B-202ENST00000470886 MRC1P22897 1456 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 LOC102724428A0A0B4J2F2 783 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 EVI5O60447 810 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 HIP1RO75146 1068 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 MOCS3O95396 460 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 ZSCAN20P17040 1043 aaPredicted RBP11.49□□□□□ -0.57
RRP1B-202ENST00000470886 SIK1P57059 783 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
RRP1B-202ENST00000470886 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 TADA2BQ86TJ2 420 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 PIK3R5Q8WYR1 880 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 N4BP2Q86UW6 1770 aaPredicted RBP11.49□□□□□ -0.57
RRP1B-202ENST00000470886 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
RRP1B-202ENST00000470886 BPIFB4P59827 614 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 CUL4BQ13620 913 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 ARHGAP44Q17R89 818 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 BRINP3Q76B58 766 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 CCDC63Q8NA47 563 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 MCUR1Q96AQ8 359 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
RRP1B-202ENST00000470886 MRPL11Q9Y3B7 192 aaKnown RBP11.49□□□□□ -0.57
RRP1B-202ENST00000470886 KRT15P19012 456 aa11.49□□□□□ -0.57
RRP1B-202ENST00000470886 CASP7P55210 303 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms