RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 C16orf45Q96MC5 204 aaPredicted RBP18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 FEZ1Q99689 392 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 THAP9Q9H5L6 903 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 KCNMB3Q9NPA1 279 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 MAPK8IP1Q9UQF2 711 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 PAXBP1Q9Y5B6 917 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 DOCK1Q14185 1865 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 POTEMA6NI47 508 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 SPDYE3A6NKU9 549 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 PIK3CDO00329 1044 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 TUBB4AP04350 444 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 MCM6Q14566 821 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 KRT31Q15323 416 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 USH1GQ495M9 461 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 Q4G0T1 1027 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 KIAA1755Q5JYT7 1200 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 UNC13DQ70J99 1090 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 SPICE1Q8N0Z3 855 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 NT5C3AQ9H0P0 336 aa18.96■□□□□ 0.63
SMARCD3-206ENST00000470588 KDM3AQ9Y4C1 1321 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 BICDL2A1A5D9 508 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 MYMKA6NI61 221 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 USP27XA6NNY8 438 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 PHF20L1A8MW92 1017 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 KCNJ18B7U540 433 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 CCNE1P24864 410 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 CIITAP33076 1130 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 SREBF1P36956 1147 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 COPB1P53618 953 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 KCNJ12Q14500 433 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 FAM83BQ5T0W9 1011 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 NBPF12Q5TAG4 269 aaPredicted RBP18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 PPFIBP1Q86W92 1011 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 TC2NQ8N9U0 490 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 NUDT12Q9BQG2 462 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 TRMT1Q9NXH9 659 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 STK24Q9Y6E0 443 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 ITIH6Q6UXX5 1313 aa18.95■□□□□ 0.62
SMARCD3-206ENST00000470588 AKR1B15C9JRZ8 316 aaPredicted RBP18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 DYNC1I1O14576 645 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 N4BP3O15049 544 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 STX10O60499 249 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 COBLO75128 1261 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 CYP3A4P08684 503 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 SUPT20HL1Q3ZLR7 823 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 RANBP17Q9H2T7 1088 aaKnown RBP18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 FEM1BQ9UK73 627 aa18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 ZC3H4Q9UPT8 1303 aaKnown RBP18.94■□□□□ 0.62
SMARCD3-206ENST00000470588 ARHGAP6O43182 974 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 GRIN3BO60391 1043 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 EEF1GP26641 437 aaKnown RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 GTF2F1P35269 517 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 PSMD2Q13200 908 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 PTPN21Q16825 1174 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 TTI2Q6NXR4 508 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 P2RX5Q93086 422 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 FAM20AQ96MK3 541 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 PANX2Q96RD6 677 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 BAG1Q99933 345 aaPredicted RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 OPLAHO14841 1288 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 CCT6AP40227 531 aaKnown RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 STK4Q13043 487 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 IRF2BP1Q8IU81 584 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 TMEM139Q8IV31 216 aa18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 DCPSQ96C86 337 aaKnown RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 P2RX7Q99572 595 aaKnown RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 SRRTQ9BXP5 876 aaKnown RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 MAGEC2Q9UBF1 373 aaPredicted RBP18.93■□□□□ 0.62
SMARCD3-206ENST00000470588 PPP1R13BQ96KQ4 1090 aa18.92■□□□□ 0.62
SMARCD3-206ENST00000470588 TRIM47Q96LD4 638 aa18.92■□□□□ 0.62
SMARCD3-206ENST00000470588 AS3MTQ9HBK9 375 aa18.92■□□□□ 0.62
SMARCD3-206ENST00000470588 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
SMARCD3-206ENST00000470588 BMP2KQ9NSY1 1161 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-206ENST00000470588 MRPL11Q9Y3B7 192 aaKnown RBP18.92■□□□□ 0.62
SMARCD3-206ENST00000470588 HIRAP54198 1017 aaPredicted RBP18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 PMS1P54277 932 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 ADKP55263 362 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 GOLGA8FQ08AF8 430 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 GOLGA8DPQ0D2H9 430 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 ECM1Q16610 540 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 FAM114A1Q8IWE2 563 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 ETNPPLQ8TBG4 499 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 DUSP9Q99956 384 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 VPS16Q9H269 839 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 TRIM49BA6NDI0 452 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 TPM1P09493 284 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 PRR16Q569H4 304 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 KCNK18Q7Z418 384 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 SCYL3Q8IZE3 742 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 NAA15Q9BXJ9 866 aaKnown RBP18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 TAB2Q9NYJ8 693 aa18.91■□□□□ 0.62
SMARCD3-206ENST00000470588 GCOM1H8Y6P7 765 aaPredicted RBP18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 ZSCAN12O43309 604 aa18.9■□□□□ 0.62
SMARCD3-206ENST00000470588 POLR2MP0CAP2 368 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms