RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CCNA1P78396 465 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 CEP55Q53EZ4 464 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 DNERQ8NFT8 737 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
COL4A5-203ENST00000470339 SMCR8Q8TEV9 937 aaPredicted RBP17.11■□□□□ 0.33
COL4A5-203ENST00000470339 HAS1Q92839 578 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 LENG9Q96B70 501 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 TAAR1Q96RJ0 339 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 RMDN3Q96TC7 470 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
COL4A5-203ENST00000470339 TXNRD2Q9NNW7 524 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 FAM155AB1AL88 458 aaPredicted RBP17.1■□□□□ 0.33
COL4A5-203ENST00000470339 SLC26A4O43511 780 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 MARCH6O60337 910 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 CYP2C8P10632 490 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 TXLNAP40222 546 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 ZNF445P59923 1031 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 SETQ01105 290 aaPredicted RBP17.1■□□□□ 0.33
COL4A5-203ENST00000470339 PRR16Q569H4 304 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 NCAPG2Q86XI2 1143 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
COL4A5-203ENST00000470339 IWS1Q96ST2 819 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 MXRA8Q9BRK3 442 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
COL4A5-203ENST00000470339 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
COL4A5-203ENST00000470339 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 STAM2O75886 525 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 ERCC3P19447 782 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 TXKP42681 527 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 PGM5Q15124 567 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 Q3C1V9 767 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 RBM43Q6ZSC3 357 aaKnown RBP17.09■□□□□ 0.33
COL4A5-203ENST00000470339 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
COL4A5-203ENST00000470339 UBIAD1Q9Y5Z9 338 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
COL4A5-203ENST00000470339 KIAA1217Q5T5P2 1943 aa17.08■□□□□ 0.33
COL4A5-203ENST00000470339 CCND2P30279 289 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 UBA7P41226 1012 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 TECP42680 631 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 SREBF2Q12772 1141 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 PLA2G4DQ86XP0 818 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.32
COL4A5-203ENST00000470339 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.32
COL4A5-203ENST00000470339 LOC102724159A0A0B4J2E5 919 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 B4DLN1 442 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 MSH4O15457 936 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 POLR2DO15514 142 aaKnown RBP17.07■□□□□ 0.32
COL4A5-203ENST00000470339 MAFGO15525 162 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 TM4SF4P48230 202 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 MRPS9P82933 396 aaKnown RBP17.07■□□□□ 0.32
COL4A5-203ENST00000470339 PWP2Q15269 919 aaKnown RBP17.07■□□□□ 0.32
COL4A5-203ENST00000470339 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 CYP2W1Q8TAV3 490 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 SLC5A5Q92911 643 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 LRWD1Q9UFC0 647 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 CCDC39Q9UFE4 941 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
COL4A5-203ENST00000470339 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
COL4A5-203ENST00000470339 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 STRNO43815 780 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 PEX10O60683 326 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 NR3C2P08235 984 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 SLFN14P0C7P3 912 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 FCER1AP12319 257 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 ITGB5P18084 799 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 EIF2AK2P19525 551 aaKnown RBP17.06■□□□□ 0.32
COL4A5-203ENST00000470339 UBXN2AP68543 259 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 KCTD2Q14681 263 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 FAM110CQ1W6H9 321 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 LONRF3Q496Y0 759 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 KRBA2Q6ZNG9 492 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 IFNL1Q8IU54 200 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 REM2Q8IYK8 340 aaPredicted RBP17.06■□□□□ 0.32
COL4A5-203ENST00000470339 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 RIT2Q99578 217 aa17.06■□□□□ 0.32
COL4A5-203ENST00000470339 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 ADGRA2Q96PE1 1338 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 DNAJC25-GNG10A0A024R161 153 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 SYCE3A1L190 88 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms