RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 RGS20O76081 388 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 CYP3A4P08684 503 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 PDCP20941 246 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
SMC1A-206ENST00000470241 ARHGAP4P98171 946 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 TAPT1Q6NXT6 567 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 PIK3AP1Q6ZUJ8 805 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 ZNF333Q96JL9 665 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 FOXP1Q9H334 677 aaPredicted RBP12.05□□□□□ -0.48
SMC1A-206ENST00000470241 VTA1Q9NP79 307 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 PDGFCQ9NRA1 345 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
SMC1A-206ENST00000470241 CNPY2Q9Y2B0 182 aa12.05□□□□□ -0.48
SMC1A-206ENST00000470241 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
SMC1A-206ENST00000470241 ITGB5P18084 799 aa12.04□□□□□ -0.48
SMC1A-206ENST00000470241 U2AF2P26368 475 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMC1A-206ENST00000470241 NONOQ15233 471 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMC1A-206ENST00000470241 MTFR1Q15390 333 aa12.04□□□□□ -0.48
SMC1A-206ENST00000470241 INF2Q27J81 1249 aa12.04□□□□□ -0.48
SMC1A-206ENST00000470241 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
SMC1A-206ENST00000470241 RTEL1Q9NZ71 1219 aa12.04□□□□□ -0.48
SMC1A-206ENST00000470241 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
SMC1A-206ENST00000470241 UBIAD1Q9Y5Z9 338 aa12.04□□□□□ -0.48
SMC1A-206ENST00000470241 ZNFX1Q9P2E3 1918 aaKnown RBP12.03□□□□□ -0.48
SMC1A-206ENST00000470241 VPS37CA5D8V6 355 aaPredicted RBP12.03□□□□□ -0.48
SMC1A-206ENST00000470241 FAM86B1E9PN63 330 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 STX6O43752 255 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 STAM2O75886 525 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 FAM86B2P0C5J1 330 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 CIITAP33076 1130 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 USP11P51784 963 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 CCDC144BQ3MJ40 725 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 TMEM63BQ5T3F8 832 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 MXRA8Q9BRK3 442 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
SMC1A-206ENST00000470241 PLXNA1Q9UIW2 1896 aa12.02□□□□□ -0.48
SMC1A-206ENST00000470241 IGLV3-22A0A075B6J6 115 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 CYP3A7-CYP3A51PA0A087WV96 503 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 MEIS1O00470 390 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 WNT7AO00755 349 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 SEPT4O43236 478 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 ADCY6O43306 1168 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 ARIH2O95376 493 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 MYCP01106 439 aaPredicted RBP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 CCL5P13501 91 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 SMPD1P17405 629 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 CYP3A7P24462 503 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 ICAM3P32942 547 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 SEMA3FQ13275 785 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 CEP55Q53EZ4 464 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 NEK8Q86SG6 692 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 SCFD2Q8WU76 684 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 LENG9Q96B70 501 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 GPRASP2Q96D09 838 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 MBOAT7Q96N66 472 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 PAK6Q9NQU5 681 aaPredicted RBP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 DDX41Q9UJV9 622 aaKnown RBP12.02□□□□□ -0.49
SMC1A-206ENST00000470241 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 LRRC37A2A6NM11 1700 aa12.02□□□□□ -0.49
SMC1A-206ENST00000470241 SPATA31C2B4DYI2 1134 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 TDP2O95551 362 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 ARP10275 920 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 AKR1A1P14550 325 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 PTGS1P23219 599 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 CNGA1P29973 690 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 ZNF76P36508 570 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 RESTQ13127 1097 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 PKP1Q13835 747 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 LETM2Q2VYF4 491 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 IQSEC1Q6DN90 963 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 NIPA1Q7RTP0 329 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 FERMT3Q86UX7 667 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 LENG1Q96BZ8 264 aaPredicted RBP12.01□□□□□ -0.49
SMC1A-206ENST00000470241 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
SMC1A-206ENST00000470241 MRVI1Q9Y6F6 885 aa12.01□□□□□ -0.49
SMC1A-206ENST00000470241 POTEFA5A3E0 1075 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 FIBPO43427 364 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 ATP9AO75110 1047 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 TXNP10599 105 aaKnown RBP12□□□□□ -0.49
SMC1A-206ENST00000470241 PDIA4P13667 645 aaKnown RBP12□□□□□ -0.49
SMC1A-206ENST00000470241 DDIT3P35638 169 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 TOB1P50616 345 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms