RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 APPP05067 770 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 ICAM1P05362 532 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 TXNP10599 105 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 CKBP12277 381 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 CASTP20810 708 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 IRS1P35568 1242 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 TDO2P48775 406 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 RBL2Q08999 1139 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 GPM6BQ13491 265 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 NBR1Q14596 966 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 SESTD1Q86VW0 696 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 C17orf80Q9BSJ5 609 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 PRR12Q9ULL5 1215 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 GFRA3O60609 400 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 NBNO60934 754 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 TFAP4Q01664 338 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 PTK7Q13308 1070 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 GPNMBQ14956 572 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 GDF6Q6KF10 455 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 KCTD1Q719H9 257 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 MYOCDQ8IZQ8 938 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 C7orf31Q8N865 590 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 DNERQ8NFT8 737 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 KATNAL1Q9BW62 490 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 NACAP1Q9BZK3 213 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 EMSYQ7Z589 1322 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 PTPRSQ13332 1948 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
SYNGAP1-205ENST00000470232 CFAP54Q96N23 3096 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 LGR5O75473 907 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 CALML3P27482 149 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 SNAP25P60880 206 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 HTRA4P83105 476 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 SMAD2Q15796 467 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 RNF207Q6ZRF8 634 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 RNF135Q8IUD6 432 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 TMEM192Q8IY95 271 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 PRSS33Q8NF86 280 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 PPP1R13LQ8WUF5 828 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 YME1L1Q96TA2 773 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 MUTYHQ9UIF7 546 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 STX8Q9UNK0 236 aa10.49□□□□□ -0.73
SYNGAP1-205ENST00000470232 TMEM221A6NGB7 291 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 PATL2C9JE40 543 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 M0R296 226 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 STXBP3O00186 592 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 GH1P01241 217 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 DEKP35659 375 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 DGKDQ16760 1214 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 RPAINQ86UA6 219 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 DCAF4Q8WV16 495 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 COPS5Q92905 334 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 CHMP4CQ96CF2 233 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 LMAN2LQ9H0V9 348 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 RANBP17Q9H2T7 1088 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 GTF2IRD1Q9UHL9 959 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 MYH7P12883 1935 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 PLIN4Q96Q06 1357 aa10.48□□□□□ -0.73
SYNGAP1-205ENST00000470232 C5orf42Q9H799 3197 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 TSPY2A6NKD2 308 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 MBTPS2O43462 519 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 RB1P06400 928 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 MMP3P08254 477 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 SMAD4Q13485 552 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 CCDC96Q2M329 555 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 IER5LQ5T953 404 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 FBXO11Q86XK2 927 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 DHX38Q92620 1227 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 APPBP2Q92624 585 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 ATOH1Q92858 354 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 PPP2R3CQ969Q6 453 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 HDAC6Q9UBN7 1215 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 RWDD3Q9Y3V2 267 aa10.47□□□□□ -0.73
SYNGAP1-205ENST00000470232 RSPH10B2B2RC85 870 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 NFIBO00712 420 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 CHGBP05060 677 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 RSPH10BP0C881 870 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 EDNRBP24530 442 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 PSEN2P49810 448 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 NUBP1P53384 320 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 RPS6P62753 249 aaKnown RBP10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 TCF15Q12870 199 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 CTC1Q2NKJ3 1217 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 ZNF618Q5T7W0 954 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 SYDE2Q5VT97 1194 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 SKAP1Q86WV1 359 aa10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 DHX37Q8IY37 1157 aaKnown RBP10.46□□□□□ -0.73
SYNGAP1-205ENST00000470232 IFNL3Q8IZI9 196 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms