RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 POLR3GO15318 223 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 KLHL41O60662 606 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 OLFM2O95897 454 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 BMP1P13497 986 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 B2MP61769 119 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 ROR1Q01973 937 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 GUCY1B3Q02153 619 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 RELQ04864 619 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 DNM1Q05193 864 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 LRRC74AQ0VAA2 488 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 SCRN1Q12765 414 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 POU4F2Q12837 409 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 NMIQ13287 307 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MOGSQ13724 837 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MAP7Q14244 749 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 KIF22Q14807 665 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 C1orf53Q5VUE5 145 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 GALNT17Q6IS24 598 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MRPL14Q6P1L8 145 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 TLDC1Q6P9B6 456 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 SLC30A9Q6PML9 568 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 PRICKLE2Q7Z3G6 844 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MILR1Q7Z6M3 343 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 GRAMD2AQ8IUY3 354 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 WDR75Q8IWA0 830 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 RAVER1Q8IY67 606 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 SYT2Q8N9I0 419 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 PPHLN1Q8NEY8 458 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 KLHDC4Q8TBB5 520 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MAGEC3Q8TD91 643 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 IPCEF1Q8WWN9 437 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 EDEM1Q92611 657 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 SNX21Q969T3 373 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 SNX27Q96L92 541 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 GORASP1Q9BQQ3 440 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 TINF2Q9BSI4 451 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 TTPALQ9BTX7 342 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 RTFDC1Q9BY42 306 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 DNAI2Q9GZS0 605 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC113Q9H0I3 377 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 PPCSQ9HAB8 311 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 ARGLU1Q9NWB6 273 aaPredicted RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 NLRP2Q9NX02 1062 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 RIMKLBQ9ULI2 386 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 PAIP2BQ9ULR5 123 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 POLIQ9UNA4 740 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 NUDCQ9Y266 331 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 BCS1LQ9Y276 419 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 PCDHB2Q9Y5E7 798 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MRPL42Q9Y6G3 142 aaKnown RBP5.7□□□□□ -1.5
COL3A1-205ENST00000470167 MAP3K5Q99683 1374 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 CLRN2A0PK11 232 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 LIN7AO14910 233 aaPredicted RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 TREHO43280 583 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 YEATS4O95619 227 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 APBB3O95704 486 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 IGHA2P01877 340 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 ATP4AP20648 1035 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 ADD2P35612 726 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 HSD17B2P37059 387 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 ETV3P41162 512 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 HALP42357 657 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 MTHFRP42898 656 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 AMPHP49418 695 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 GJA9P57773 515 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 TUBA4AP68366 448 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 DR1Q01658 176 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 TMEM62Q0P6H9 643 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 STK3Q13188 491 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 TCIRG1Q13488 830 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC57Q2TAC2 916 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 LRRFIP1Q32MZ4 808 aaKnown RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 BBS9Q3SYG4 887 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 EAPPQ56P03 285 aaPredicted RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 CAVIN4Q5BKX8 364 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 FKBP15Q5T1M5 1219 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 PPP4R3AQ6IN85 833 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 BICDL1Q6ZP65 573 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 CEP68Q76N32 757 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 TMC4Q7Z404 712 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 TREML1Q86YW5 311 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 SPATA2LQ8IUW3 424 aaPredicted RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 DZIP1LQ8IYY4 767 aaKnown RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 RNF10Q8N5U6 811 aaKnown RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 NEK11Q8NG66 645 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 SKA1Q96BD8 255 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 GIMAP5Q96F15 307 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 NRBF2Q96F24 287 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 COG3Q96JB2 828 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 HSH2DQ96JZ2 352 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 FAM129BQ96TA1 746 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 VCPKMTQ9H867 229 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 ZWILCHQ9H900 591 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 PTPRHQ9HD43 1115 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 HELLSQ9NRZ9 838 aa5.69□□□□□ -1.5
COL3A1-205ENST00000470167 PNMA8BQ9ULN7 279 aaPredicted RBP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.69□□□□□ -1.5
COL3A1-205ENST00000470167 MYPNQ86TC9 1320 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms