RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 SLC12A7Q9Y666 1083 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 MRVI1Q9Y6F6 885 aa8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 BAZ2BQ9UIF8 2168 aaKnown RBP8.31□□□□□ -1.08
SNRPD3-205ENST00000468770 SH2B2O14492 632 aaPredicted RBP8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 CDC45O75419 566 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 ACRP10323 421 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 CASTP20810 708 aaKnown RBP8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 CCL23P55773 120 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 LAMC2Q13753 1193 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 PGM5Q15124 567 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 DGKDQ16760 1214 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 TMEM240Q5SV17 173 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 NFRKBQ6P4R8 1299 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 KCNV1Q6PIU1 500 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 ZNF365Q70YC5 407 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 RPUSD2Q8IZ73 545 aaKnown RBP8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 NEK1Q96PY6 1258 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 NOC4LQ9BVI4 516 aaKnown RBP8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 SPZ1Q9BXG8 430 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 LRRC2Q9BYS8 371 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 IL23AQ9NPF7 189 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 STXBP5LQ9Y2K9 1186 aa8.3□□□□□ -1.08
SNRPD3-205ENST00000468770 UMODL1Q5DID0 1318 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 LRRC37A2A6NM11 1700 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 RGS20O76081 388 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 FGBP02675 491 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 MMP3P08254 477 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 TGFB3P10600 412 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 CYP2C9P11712 490 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 RXRAP19793 462 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 CCND2P30279 289 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 ARHGAP1Q07960 439 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 KRT32Q14532 448 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 RAB11FIP4Q86YS3 637 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 CMTR1Q8N1G2 835 aaKnown RBP8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 CCDC82Q8N4S0 544 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 SRBD1Q8N5C6 995 aaKnown RBP8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 FANCBQ8NB91 859 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 SLC17A8Q8NDX2 589 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 SMARCC2Q8TAQ2 1214 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 PPP1R13LQ8WUF5 828 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 CUL5Q93034 780 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 ZFP91Q96JP5 570 aaPredicted RBP8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 MTIF3Q9H2K0 278 aaKnown RBP8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
SNRPD3-205ENST00000468770 SORBS3O60504 671 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 PPFIA4O75335 1185 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 PLEKHA8P1O95397 391 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 NEFLP07196 543 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 FGD1P98174 961 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 PTGISQ16647 500 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 TSGA10IPQ3SY00 556 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 GNPTABQ3T906 1256 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 CELF3Q5SZQ8 465 aaKnown RBP8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 USP17L6PQ6QN14 398 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 OTOP2Q7RTS6 562 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 SGMS1Q86VZ5 419 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 MICU3Q86XE3 530 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 C7orf31Q8N865 590 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 IL31RAQ8NI17 732 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 PPTC7Q8NI37 304 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 HERVK_113Q902F9 699 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 SCLYQ96I15 445 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 SPATA33Q96N06 139 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 GUCD1Q96NT3 240 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 KATNAL1Q9BW62 490 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 PSTPIP2Q9H939 334 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 MLXIPQ9HAP2 919 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 RTEL1Q9NZ71 1219 aa8.28□□□□□ -1.08
SNRPD3-205ENST00000468770 TMEM265A0A087WTH1 108 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 hCG_1642624A0A1W2PR95 340 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 PIK3CDO00329 1044 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 MEIS2O14770 477 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 STAM2O75886 525 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 GGPS1O95749 300 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 HMGB1P09429 215 aaKnown RBP8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 UBA1P22314 1058 aaKnown RBP8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 DNAJB2P25686 324 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 PSEN2P49810 448 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 EXOSC10Q01780 885 aaKnown RBP8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 SP2Q02086 613 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 BFSP2Q13515 415 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 ADCK5Q3MIX3 580 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 HSDL1Q3SXM5 330 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 XRRA1Q6P2D8 792 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 TMTC3Q6ZXV5 915 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 RASEFQ8IZ41 740 aa8.27□□□□□ -1.09
SNRPD3-205ENST00000468770 KAT2BQ92831 832 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms