RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 MAPK8IP1Q9UQF2 711 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 ZBTB1Q9Y2K1 713 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 UBR3Q6ZT12 1888 aa6.47□□□□□ -1.37
U2AF1-207ENST00000468039 UPK3BL1B0FP48 263 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 UPK3BL2E5RIL1 263 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 IGF2BP3O00425 579 aaKnown RBP eCLIP6.46□□□□□ -1.38
U2AF1-207ENST00000468039 RAG1P15918 1043 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 HOXA10P31260 410 aaPredicted RBP6.46□□□□□ -1.38
U2AF1-207ENST00000468039 EIF4A1P60842 406 aaKnown RBP6.46□□□□□ -1.38
U2AF1-207ENST00000468039 CLCQ05315 142 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 QSER1Q2KHR3 1735 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 KRT24Q2M2I5 525 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 FBXW10Q5XX13 1052 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 SLFN12Q8IYM2 578 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 NETO1Q8TDF5 533 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 CYB5D2Q8WUJ1 264 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 CCDC74BQ96LY2 380 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 SPON1Q9HCB6 807 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 GMIPQ9P107 970 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 SRP68Q9UHB9 627 aaKnown RBP6.46□□□□□ -1.38
U2AF1-207ENST00000468039 USP16Q9Y5T5 823 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 KDM3BQ7LBC6 1761 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 LRP5O75197 1615 aa6.46□□□□□ -1.38
U2AF1-207ENST00000468039 CICQ96RK0 1608 aaPredicted RBP6.46□□□□□ -1.38
U2AF1-207ENST00000468039 MYH14Q7Z406 1995 aaKnown RBP6.46□□□□□ -1.38
U2AF1-207ENST00000468039 ZNF831Q5JPB2 1677 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 CHURC1-FNTBB4DL54 471 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 RPS6KA4O75676 772 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 EOMESO95936 686 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 A1BGP04217 495 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 SNRPA1P09661 255 aaKnown RBP6.45□□□□□ -1.38
U2AF1-207ENST00000468039 ITIH2P19823 946 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 GBP1P32455 592 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 CDH24Q86UP0 819 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 VPS37DQ86XT2 251 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 DTX1Q86Y01 620 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 FAM181AQ8N9Y4 354 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 ACBD3Q9H3P7 528 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 CAPN10Q9HC96 672 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 BSDC1Q9NW68 430 aaPredicted RBP6.45□□□□□ -1.38
U2AF1-207ENST00000468039 PPP1R1BQ9UD71 204 aaPredicted RBP6.45□□□□□ -1.38
U2AF1-207ENST00000468039 ZC3H7BQ9UGR2 993 aaKnown RBP6.45□□□□□ -1.38
U2AF1-207ENST00000468039 ANGEL1Q9UNK9 670 aaKnown RBP6.45□□□□□ -1.38
U2AF1-207ENST00000468039 CEP131Q9UPN4 1083 aa6.45□□□□□ -1.38
U2AF1-207ENST00000468039 SOS1Q07889 1333 aaPredicted RBP6.45□□□□□ -1.38
U2AF1-207ENST00000468039 COL15A1P39059 1388 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 SLC22A31A6NKX4 558 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 FAM155AB1AL88 458 aaPredicted RBP6.44□□□□□ -1.38
U2AF1-207ENST00000468039 CCER2I3L3R5 266 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 CHL1O00533 1208 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 STARD3NLO95772 234 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 CEACAM5P06731 702 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 RFC4P35249 363 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 RAD51AP2Q09MP3 1159 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 IFI16Q16666 785 aaKnown RBP6.44□□□□□ -1.38
U2AF1-207ENST00000468039 ARSHQ5FYA8 562 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 NGEFQ8N5V2 710 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 FLAD1Q8NFF5 587 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 HEXIM2Q96MH2 286 aaKnown RBP6.44□□□□□ -1.38
U2AF1-207ENST00000468039 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 C4AP0C0L4 1744 aa6.44□□□□□ -1.38
U2AF1-207ENST00000468039 USP42Q9H9J4 1324 aaKnown RBP6.44□□□□□ -1.38
U2AF1-207ENST00000468039 UTRNP46939 3433 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 GOLGB1Q14789 3259 aaKnown RBP6.43□□□□□ -1.38
U2AF1-207ENST00000468039 TMEM265A0A087WTH1 108 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 CBX7O95931 251 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 ANXA1P04083 346 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 GYS1P13807 737 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 EIF2S2P20042 333 aaKnown RBP6.43□□□□□ -1.38
U2AF1-207ENST00000468039 POLD1P28340 1107 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 GJA8P48165 433 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 OXCT1P55809 520 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 MSMPQ1L6U9 139 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 OVOS1Q6IE37 1185 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 STK11IPQ8N1F8 1099 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 RIN3Q8TB24 985 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 RASGRP4Q8TDF6 673 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 CPLX3Q8WVH0 158 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 TMEM40Q8WWA1 233 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 UBXN4Q92575 508 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 TSR2Q969E8 191 aaKnown RBP6.43□□□□□ -1.38
U2AF1-207ENST00000468039 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 KIF2CQ99661 725 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 GINM1Q9NU53 330 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 IFT57Q9NWB7 429 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 ZNRF3Q9ULT6 936 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 EFR3BQ9Y2G0 817 aa6.43□□□□□ -1.38
U2AF1-207ENST00000468039 LAMB4A4D0S4 1761 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 ELL2O00472 640 aaPredicted RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 MMP10P09238 476 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 ZNF853P0CG23 659 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 MYL6BP14649 208 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 HMGB2P26583 209 aaKnown RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 IL6STP40189 918 aaPredicted RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 EIF5P55010 431 aaKnown RBP6.42□□□□□ -1.38
U2AF1-207ENST00000468039 GNAI1P63096 354 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 DDR1Q08345 913 aa6.42□□□□□ -1.38
U2AF1-207ENST00000468039 PROSER3Q2NL68 480 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms