RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 NAP1L4Q99733 375 aaKnown RBP16.78■□□□□ 0.28
DDX56-208ENST00000467318 TINF2Q9BSI4 451 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
DDX56-208ENST00000467318 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
DDX56-208ENST00000467318 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 SYNGAP1Q96PV0 1343 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 PDE4DQ08499 809 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 RESTQ13127 1097 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 OTOP1Q7RTM1 612 aa16.78■□□□□ 0.28
DDX56-208ENST00000467318 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.28
DDX56-208ENST00000467318 CIITAP33076 1130 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 LBX1P52954 281 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 UBXN2AP68543 259 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 MOXD1Q6UVY6 613 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 RAET1EQ8TD07 263 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 PXYLP1Q8TE99 480 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
DDX56-208ENST00000467318 LCTP09848 1927 aa16.77■□□□□ 0.27
DDX56-208ENST00000467318 HTTP42858 3142 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 CENPFP49454 3210 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 MYCLP12524 364 aaPredicted RBP16.76■□□□□ 0.27
DDX56-208ENST00000467318 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
DDX56-208ENST00000467318 ZNF76P36508 570 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 LETM2Q2VYF4 491 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 MYSM1Q5VVJ2 828 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 PPP4R3AQ6IN85 833 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 ARMCX2Q7L311 632 aa16.76■□□□□ 0.27
DDX56-208ENST00000467318 CYP3A7-CYP3A51PA0A087WV96 503 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 MAFGO15525 162 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 CYP3A7P24462 503 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 MRPS9P82933 396 aaKnown RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 CEP55Q53EZ4 464 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 IL31RAQ8NI17 732 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 ABHD16BQ9H3Z7 469 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 IGHA2P01877 340 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 CCL14Q16627 93 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 GNPTABQ3T906 1256 aa16.75■□□□□ 0.27
DDX56-208ENST00000467318 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.75■□□□□ 0.27
DDX56-208ENST00000467318 MYH7BA7E2Y1 1941 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 EDIL3O43854 480 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 ADCY3O60266 1144 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
DDX56-208ENST00000467318 MFSD14CQ5VZR4 134 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 NIPA1Q7RTP0 329 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 NLRX1Q86UT6 975 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 SLAIN1Q8ND83 568 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 CDHR1Q96JP9 859 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
DDX56-208ENST00000467318 MXRA8Q9BRK3 442 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 VTA1Q9NP79 307 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 LMBRD1Q9NUN5 540 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 FLRT1Q9NZU1 646 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 NRBP1Q9UHY1 535 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 UBIAD1Q9Y5Z9 338 aa16.74■□□□□ 0.27
DDX56-208ENST00000467318 FAM86B1E9PN63 330 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 MEIS1O00470 390 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 SNAI1O95863 264 aaPredicted RBP16.73■□□□□ 0.27
DDX56-208ENST00000467318 FAM86B2P0C5J1 330 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 ATP2B1P20020 1258 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 SETQ01105 290 aaPredicted RBP16.73■□□□□ 0.27
DDX56-208ENST00000467318 PKN2Q16513 984 aaKnown RBP16.73■□□□□ 0.27
DDX56-208ENST00000467318 Q4G0T1 1027 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 TTC38Q5R3I4 469 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 KCNV1Q6PIU1 500 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
DDX56-208ENST00000467318 TRIB2Q92519 343 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 ANP32BQ92688 251 aaKnown RBP16.73■□□□□ 0.27
DDX56-208ENST00000467318 GPRASP2Q96D09 838 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 MBOAT7Q96N66 472 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
DDX56-208ENST00000467318 TGFB3P10600 412 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 ITGB5P18084 799 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 ZNF445P59923 1031 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
DDX56-208ENST00000467318 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 DDX25Q9UHL0 483 aaKnown RBP16.72■□□□□ 0.27
DDX56-208ENST00000467318 IGLV3-22A0A075B6J6 115 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 BMP15O95972 392 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 MBD3O95983 291 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 HMGCRP04035 888 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 CYP2C19P33261 490 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 MTMR1Q13613 665 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 PRR16Q569H4 304 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
DDX56-208ENST00000467318 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms