RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 FANCLQ9NW38 375 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
SNED1-208ENST00000466618 GOLGA8AA7E2F4 631 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 ZNF157P51786 506 aaPredicted RBP17.25■□□□□ 0.35
SNED1-208ENST00000466618 ADKP55263 362 aaKnown RBP17.25■□□□□ 0.35
SNED1-208ENST00000466618 VSNL1P62760 191 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 CEP112Q8N8E3 955 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 CDC23Q9UJX2 597 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 ABT1Q9ULW3 272 aaKnown RBP17.25■□□□□ 0.35
SNED1-208ENST00000466618 FAM155AB1AL88 458 aaPredicted RBP17.24■□□□□ 0.35
SNED1-208ENST00000466618 VCAM1P19320 739 aa17.24■□□□□ 0.35
SNED1-208ENST00000466618 SLC1A4P43007 532 aa17.24■□□□□ 0.35
SNED1-208ENST00000466618 ASPRV1Q53RT3 343 aa17.24■□□□□ 0.35
SNED1-208ENST00000466618 STAG2Q8N3U4 1231 aa17.24■□□□□ 0.35
SNED1-208ENST00000466618 FAM204AQ9H8W3 233 aa17.24■□□□□ 0.35
SNED1-208ENST00000466618 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
SNED1-208ENST00000466618 PHACTR2O75167 634 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 SLC10A3P09131 477 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 PARP1P09874 1014 aaKnown RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 CMA1P23946 247 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 MTF1Q14872 753 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 NTRK3Q16288 839 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 RTN1Q16799 776 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 CT47A1Q5JQC4 288 aaPredicted RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 GPATCH4Q5T3I0 446 aaKnown RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 PDILTQ8N807 584 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 CCDC102AQ96A19 550 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 A0A087WUV0 522 aaPredicted RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 GOLGA8HP0CJ92 632 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 KIF5BP33176 963 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 FUT2Q10981 343 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 PROCA1Q8NCQ7 364 aaPredicted RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
SNED1-208ENST00000466618 RBM28Q9NW13 759 aaKnown RBP17.23■□□□□ 0.35
SNED1-208ENST00000466618 A0A0U1RQJ8 604 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 RAD21O60216 631 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 BMP3P12645 472 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 FAM83BQ5T0W9 1011 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 TMTC3Q6ZXV5 915 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 CCDC91Q7Z6B0 441 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 ATRIPQ8WXE1 791 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 MYH4Q9Y623 1939 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 PLEKHA8P1O95397 391 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 GTF2A2P52657 109 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 PNOCQ13519 176 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 HSP90B2PQ58FF3 399 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 BTNL9Q6UXG8 535 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 KAT2BQ92831 832 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 MED4Q9NPJ6 270 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
SNED1-208ENST00000466618 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
SNED1-208ENST00000466618 KLRF2D3W0D1 207 aa17.21■□□□□ 0.35
SNED1-208ENST00000466618 PLA2G6O60733 806 aa17.21■□□□□ 0.35
SNED1-208ENST00000466618 TFRCP02786 760 aaKnown RBP17.21■□□□□ 0.35
SNED1-208ENST00000466618 TTBK2Q6IQ55 1244 aa17.21■□□□□ 0.35
SNED1-208ENST00000466618 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
SNED1-208ENST00000466618 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.34
SNED1-208ENST00000466618 CYTH3O43739 400 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.34
SNED1-208ENST00000466618 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 SMARCA1P28370 1054 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 GNAQP50148 359 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 DNAJC21Q5F1R6 531 aaKnown RBP17.21■□□□□ 0.34
SNED1-208ENST00000466618 TREML2Q5T2D2 321 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 SPECC1LQ69YQ0 1117 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 CXorf56Q9H5V9 222 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.34
SNED1-208ENST00000466618 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 HPSEQ9Y251 543 aa17.21■□□□□ 0.34
SNED1-208ENST00000466618 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 RNF40O75150 1001 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 SYF2O95926 243 aaKnown RBP17.2■□□□□ 0.34
SNED1-208ENST00000466618 CETPP11597 493 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 IFNAR1P17181 557 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 SYKP43405 635 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
SNED1-208ENST00000466618 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 ANO1Q5XXA6 986 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
SNED1-208ENST00000466618 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
SNED1-208ENST00000466618 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
SNED1-208ENST00000466618 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms