RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 NUP58Q9BVL2 599 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 RIC8AQ9NPQ8 531 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 ZNF185O15231 689 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 KRT83P78385 493 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 BRD3Q15059 726 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 VWA3BQ502W6 1294 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 APOBEC3HQ6NTF7 200 aaKnown RBP11.58□□□□□ -0.55
UFD1-206ENST00000466373 CCDC42Q96M95 316 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 FGFBP2Q9BYJ0 223 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 STK17AQ9UEE5 414 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.55
UFD1-206ENST00000466373 ADAMTSL1Q8N6G6 1762 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 E9PMD0 336 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 ZNF263O14978 683 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 KRT86O43790 486 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 TAL1P17542 331 aaPredicted RBP11.58□□□□□ -0.56
UFD1-206ENST00000466373 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
UFD1-206ENST00000466373 MMS19Q96T76 1030 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 SAR1BQ9Y6B6 198 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 ZBTB5O15062 677 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 HLA-DOAP06340 250 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 MRPL12P52815 198 aaKnown RBP11.58□□□□□ -0.56
UFD1-206ENST00000466373 TRAPPC11Q7Z392 1133 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 NELFCDQ8IXH7 590 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 PROM2Q8N271 834 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 TEKT1Q969V4 418 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 ERGIC2Q96RQ1 377 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 ZHX3Q9H4I2 956 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.56
UFD1-206ENST00000466373 PLIN4Q96Q06 1357 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 H3BQF6 201 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 hCG_1984214I3L0E3 225 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 PSMD14O00487 310 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 ZMYND10O75800 440 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 STAT3P40763 770 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 PDIA5Q14554 519 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 RRAGAQ7L523 313 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 ZNF713Q8N859 430 aaPredicted RBP11.57□□□□□ -0.56
UFD1-206ENST00000466373 RETREG2Q8NC44 543 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 MSANTD4Q8NCY6 345 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 PDE11AQ9HCR9 933 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 JADE2Q9NQC1 790 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 PCDHA1Q9Y5I3 950 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 MYH10P35580 1976 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 SPATA31A6Q5VVP1 1343 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 SLC1A4P43007 532 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 TUBB2AQ13885 445 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 SPA17Q15506 151 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 MSL1Q68DK7 614 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 ZNF622Q969S3 477 aaKnown RBP eCLIP11.57□□□□□ -0.564e-19■□□□□ 10.1
UFD1-206ENST00000466373 GDAP1L1Q96MZ0 367 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 PSMB7Q99436 277 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 TUBB2BQ9BVA1 445 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 DEF6Q9H4E7 631 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 ARHGAP20Q9P2F6 1191 aa11.57□□□□□ -0.56
UFD1-206ENST00000466373 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 DDTLA6NHG4 134 aaPredicted RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 POTECB2RU33 542 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 TRAF5O00463 557 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 EEF2P13639 858 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 CRKP46108 304 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 KIF5AQ12840 1032 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 COASYQ13057 564 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 ORC2Q13416 577 aaPredicted RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 CRACR2AQ9BSW2 395 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 NLRC4Q9NPP4 1024 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 SWAP70Q9UH65 585 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 RAB21Q9UL25 225 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 LRRC53A6NM62 1247 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 EIF3CLB5ME19 914 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 N4BP1O75113 896 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 PPP1R2P41236 205 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 CLK2P49760 499 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 APBA1Q02410 837 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 TMEM119Q4V9L6 283 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 PPP4R3AQ6IN85 833 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 EIF3CQ99613 913 aaKnown RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 UBXN6Q9BZV1 441 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 MLXIPQ9HAP2 919 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 PANK4Q9NVE7 773 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 TRPC5Q9UL62 973 aaPredicted RBP11.56□□□□□ -0.56
UFD1-206ENST00000466373 MYH4Q9Y623 1939 aa11.56□□□□□ -0.56
UFD1-206ENST00000466373 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms