RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 BADQ92934 168 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 CUL5Q93034 780 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 LBHD1Q9BQE6 289 aaPredicted RBP11.73□□□□□ -0.53
CD40-204ENST00000466205 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
CD40-204ENST00000466205 PSTPIP2Q9H939 334 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
CD40-204ENST00000466205 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 ARVCFO00192 962 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
CD40-204ENST00000466205 RGS20O76081 388 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 ITGB8P26012 769 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 CPT1AP50416 773 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 FAAP100Q0VG06 881 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 FUT2Q10981 343 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 AFG1LQ8WV93 481 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 PHKBQ93100 1093 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 GDF15Q99988 308 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
CD40-204ENST00000466205 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
CD40-204ENST00000466205 Q9Y3F1 56 aa11.72□□□□□ -0.53
CD40-204ENST00000466205 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 ELP1O95163 1332 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 NKRFO15226 690 aaKnown RBP eCLIP11.71□□□□□ -0.53
CD40-204ENST00000466205 GH1P01241 217 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.53
CD40-204ENST00000466205 NKX3-2P78367 333 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.53
CD40-204ENST00000466205 PURAQ00577 322 aaKnown RBP11.71□□□□□ -0.53
CD40-204ENST00000466205 FAM47CQ5HY64 1035 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 C1orf53Q5VUE5 145 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 VSIG10LQ86VR7 867 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.53
CD40-204ENST00000466205 SLC26A6Q9BXS9 759 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 PPP1R12CQ9BZL4 782 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 MAF1Q9H063 256 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 TMEM260Q9NX78 707 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 PKD2L1Q9P0L9 805 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 PCDHA6Q9UN73 950 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 PCDHA8Q9Y5H6 950 aa11.71□□□□□ -0.53
CD40-204ENST00000466205 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 SMCO2A6NFE2 343 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 RBAK-RBAKDNI3L0D1 243 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 STXBP3O00186 592 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 EPB41L2O43491 1005 aaKnown RBP11.7□□□□□ -0.54
CD40-204ENST00000466205 GGPS1O95749 300 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 MMP3P08254 477 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 RAG1P15918 1043 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 UBA1P22314 1058 aaKnown RBP11.7□□□□□ -0.54
CD40-204ENST00000466205 CDK7P50613 346 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 SP2Q02086 613 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 SP4Q02446 784 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 ARHGAP1Q07960 439 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 ANKRD33Q7Z3H0 272 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 FAM126BQ8IXS8 530 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 SAMD3Q8N6K7 520 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 AGXT2Q9BYV1 514 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 TRPV6Q9H1D0 765 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
CD40-204ENST00000466205 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 CCDC196A0A1B0GTZ2 297 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 ADAMTS3O15072 1205 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
CD40-204ENST00000466205 B4GALT4O60513 344 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 CABYRO75952 493 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 ZNF286BP0CG31 522 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 FXR1P51114 621 aaKnown RBP eCLIP11.69□□□□□ -0.54
CD40-204ENST00000466205 ADCY7P51828 1080 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 PFKFB3Q16875 520 aaPredicted RBP11.69□□□□□ -0.54
CD40-204ENST00000466205 BRDTQ58F21 947 aaPredicted RBP11.69□□□□□ -0.54
CD40-204ENST00000466205 MTG1Q9BT17 334 aaPredicted RBP11.69□□□□□ -0.54
CD40-204ENST00000466205 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 MLXIPQ9HAP2 919 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
CD40-204ENST00000466205 TELO2Q9Y4R8 837 aa11.69□□□□□ -0.54
CD40-204ENST00000466205 KIAA1217Q5T5P2 1943 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 UMODL1Q5DID0 1318 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 A6NJR5 290 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 SOX1O00570 391 aaPredicted RBP11.68□□□□□ -0.54
CD40-204ENST00000466205 CYP2C9P11712 490 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 SCG2P13521 617 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 RCAN1P53805 252 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 AKAP17AQ02040 695 aaKnown RBP11.68□□□□□ -0.54
CD40-204ENST00000466205 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 NTRK3Q16288 839 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 PKN1Q16512 942 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 HSDL1Q3SXM5 330 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 GNPTABQ3T906 1256 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms