RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 NPY5RQ15761 445 aa21.05■□□□□ 0.96
HOXA9-203ENST00000465941 ANO1Q5XXA6 986 aa21.05■□□□□ 0.96
HOXA9-203ENST00000465941 WDR11Q9BZH6 1224 aa21.05■□□□□ 0.96
HOXA9-203ENST00000465941 Q9Y3F1 56 aa21.05■□□□□ 0.96
HOXA9-203ENST00000465941 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.04■□□□□ 0.96
HOXA9-203ENST00000465941 M0R2N6 131 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 ADCY6O43306 1168 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 RGS20O76081 388 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 SMPD1P17405 629 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 DUSP28Q4G0W2 176 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 JAKMIP3Q5VZ66 844 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 SEPT14Q6ZU15 432 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 BLIDQ8IZY5 108 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 ANKLE1Q8NAG6 615 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 SNX21Q969T3 373 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 ANO3Q9BYT9 981 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 XPNPEP3Q9NQH7 507 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 GJB4Q9NTQ9 266 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 KCNJ14Q9UNX9 436 aa21.04■□□□□ 0.96
HOXA9-203ENST00000465941 GNEQ9Y223 722 aaKnown RBP21.04■□□□□ 0.96
HOXA9-203ENST00000465941 SREBF1P36956 1147 aa21.03■□□□□ 0.96
HOXA9-203ENST00000465941 TTLL4Q14679 1199 aa21.03■□□□□ 0.96
HOXA9-203ENST00000465941 CCDC62Q6P9F0 684 aa21.03■□□□□ 0.96
HOXA9-203ENST00000465941 ARRDC4Q8NCT1 418 aa21.03■□□□□ 0.96
HOXA9-203ENST00000465941 PGBD1Q96JS3 809 aa21.03■□□□□ 0.96
HOXA9-203ENST00000465941 INPP4AQ96PE3 977 aaPredicted RBP21.03■□□□□ 0.96
HOXA9-203ENST00000465941 MCM3APO60318 1980 aa21.03■□□□□ 0.96
HOXA9-203ENST00000465941 LRRC37A2A6NM11 1700 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 NKRFO15226 690 aaKnown RBP eCLIP21.02■□□□□ 0.96
HOXA9-203ENST00000465941 TXNP10599 105 aaKnown RBP21.02■□□□□ 0.96
HOXA9-203ENST00000465941 TGFB3P10600 412 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 NKX3-2P78367 333 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 CUL4AQ13619 759 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 TMEM63BQ5T3F8 832 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 KCNV1Q6PIU1 500 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 CRYGNQ8WXF5 182 aa21.02■□□□□ 0.96
HOXA9-203ENST00000465941 LENG1Q96BZ8 264 aaPredicted RBP21.02■□□□□ 0.96
HOXA9-203ENST00000465941 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.02■□□□□ 0.96
HOXA9-203ENST00000465941 ADAMTS4O75173 837 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 CYP3A4P08684 503 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 GJA9P57773 515 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 TRIM29Q14134 588 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 GNPTABQ3T906 1256 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 FAM184AQ8NB25 1140 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 RASGRP4Q8TDF6 673 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 ZFP91Q96JP5 570 aaPredicted RBP21.01■□□□□ 0.95
HOXA9-203ENST00000465941 UPF3AQ9H1J1 476 aaKnown RBP21.01■□□□□ 0.95
HOXA9-203ENST00000465941 RTEL1Q9NZ71 1219 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 DDX41Q9UJV9 622 aaKnown RBP21.01■□□□□ 0.95
HOXA9-203ENST00000465941 UBIAD1Q9Y5Z9 338 aa21.01■□□□□ 0.95
HOXA9-203ENST00000465941 SPATA31C2B4DYI2 1134 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 K7ELQ4 463 aaPredicted RBP21■□□□□ 0.95
HOXA9-203ENST00000465941 DNM1LO00429 736 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 CAPN15O75808 1086 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 ARIH2O95376 493 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 PGK1P00558 417 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 ITGB5P18084 799 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 ICAM3P32942 547 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 MNX1P50219 401 aaPredicted RBP21■□□□□ 0.95
HOXA9-203ENST00000465941 ARHGAP4P98171 946 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 LRRC41Q15345 812 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 UBE2Q1Q7Z7E8 422 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 RNF180Q86T96 592 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 NLRX1Q86UT6 975 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 KLHDC9Q8NEP7 349 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 SPC25Q9HBM1 224 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 MRVI1Q9Y6F6 885 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 SYNRGQ9UMZ2 1314 aa21■□□□□ 0.95
HOXA9-203ENST00000465941 DYNC1LI2O43237 492 aaPredicted RBP20.99■□□□□ 0.95
HOXA9-203ENST00000465941 MMP1P03956 469 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 RGS19P49795 217 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 LY6KQ17RY6 165 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 KRT40Q6A162 431 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 TLK2Q86UE8 772 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 GPRASP2Q96D09 838 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 C8orf76Q96K31 380 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 AP5M1Q9H0R1 490 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 KIF3AQ9Y496 699 aa20.99■□□□□ 0.95
HOXA9-203ENST00000465941 BRCA2P51587 3418 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 CTAGE5O15320 804 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 MAFGO15525 162 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 FIBPO43427 364 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 CST5P28325 142 aaPredicted RBP20.98■□□□□ 0.95
HOXA9-203ENST00000465941 KRT2P35908 639 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 USP11P51784 963 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 CEP55Q53EZ4 464 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 GJC2Q5T442 439 aaPredicted RBP20.98■□□□□ 0.95
HOXA9-203ENST00000465941 KRT25Q7Z3Z0 450 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 FBXO18Q8NFZ0 1043 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 OXER1Q8TDS5 423 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 CDHR1Q96JP9 859 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 MXRA8Q9BRK3 442 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 BRMS1Q9HCU9 246 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 JADE2Q9NQC1 790 aa20.98■□□□□ 0.95
HOXA9-203ENST00000465941 FARP2O94887 1054 aaPredicted RBP20.97■□□□□ 0.95
HOXA9-203ENST00000465941 C6orf222P0C671 652 aaPredicted RBP20.97■□□□□ 0.95
HOXA9-203ENST00000465941 PTGS1P23219 599 aa20.97■□□□□ 0.95
HOXA9-203ENST00000465941 SP2Q02086 613 aa20.97■□□□□ 0.95
HOXA9-203ENST00000465941 SEMA3FQ13275 785 aa20.97■□□□□ 0.95
HOXA9-203ENST00000465941 CCSAPQ6IQ19 270 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms