RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 C6orf50Q9HD87 102 aa14.2□□□□□ -0.14
CHPF2-202ENST00000465601 TMEM260Q9NX78 707 aa14.2□□□□□ -0.14
CHPF2-202ENST00000465601 ORC3Q9UBD5 711 aaPredicted RBP14.2□□□□□ -0.14
CHPF2-202ENST00000465601 GNEQ9Y223 722 aaKnown RBP14.2□□□□□ -0.14
CHPF2-202ENST00000465601 FRMPD4Q14CM0 1322 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 SYNRGQ9UMZ2 1314 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 ESYT2A0FGR8 921 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 MYADML2A6NDP7 307 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 JAK2O60674 1132 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 ADAMTS4O75173 837 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 ARIH2O95376 493 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 C6orf222P0C671 652 aaPredicted RBP14.19□□□□□ -0.14
CHPF2-202ENST00000465601 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
CHPF2-202ENST00000465601 MRPS9P82933 396 aaKnown RBP14.19□□□□□ -0.14
CHPF2-202ENST00000465601 MLLT1Q03111 559 aaPredicted RBP14.19□□□□□ -0.14
CHPF2-202ENST00000465601 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 JAKMIP3Q5VZ66 844 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 RNF180Q86T96 592 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 NSUN7Q8NE18 718 aaKnown RBP14.19□□□□□ -0.14
CHPF2-202ENST00000465601 COPS5Q92905 334 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 SPC25Q9HBM1 224 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 SH3GLB2Q9NR46 395 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 RTEL1Q9NZ71 1219 aa14.19□□□□□ -0.14
CHPF2-202ENST00000465601 STK36Q9NRP7 1315 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 KBTBD13C9JR72 458 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 DNM1LO00429 736 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 RGS20O76081 388 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 FOSP01100 380 aaPredicted RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 FDPSP14324 419 aaKnown RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 GNA11P29992 359 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 CLK2P49760 499 aaKnown RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 GJA9P57773 515 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 NLRP5P59047 1200 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 BEX3Q00994 111 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 LY6KQ17RY6 165 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 CCDC62Q6P9F0 684 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 TLK2Q86UE8 772 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 KLHDC9Q8NEP7 349 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 SENP6Q9GZR1 1112 aaPredicted RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 AP5M1Q9H0R1 490 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 UPF3AQ9H1J1 476 aaKnown RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 C11orf49Q9H6J7 331 aa14.18□□□□□ -0.14
CHPF2-202ENST00000465601 SH2B1Q9NRF2 756 aaPredicted RBP14.18□□□□□ -0.14
CHPF2-202ENST00000465601 DOCK5Q9H7D0 1870 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 CTAGE5O15320 804 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 COL6A1P12109 1028 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 KCNA10Q16322 511 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 GNASQ5JWF2 1037 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 PCNX4Q63HM2 1172 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 TEX2Q8IWB9 1127 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 REXO1Q8N1G1 1221 aaKnown RBP14.17□□□□□ -0.14
CHPF2-202ENST00000465601 RASGRP4Q8TDF6 673 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 FERMT2Q96AC1 680 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 ALG1Q9BT22 464 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 EHMT1Q9H9B1 1298 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 GJB4Q9NTQ9 266 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 DDX41Q9UJV9 622 aaKnown RBP14.17□□□□□ -0.14
CHPF2-202ENST00000465601 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 Q9Y3F1 56 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 MRVI1Q9Y6F6 885 aa14.17□□□□□ -0.14
CHPF2-202ENST00000465601 ALPK3Q96L96 1907 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 NKRFO15226 690 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHPF2-202ENST00000465601 AP3B2Q13367 1082 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 FSCN1Q16658 493 aaKnown RBP14.16□□□□□ -0.14
CHPF2-202ENST00000465601 CCSAPQ6IQ19 270 aaPredicted RBP14.16□□□□□ -0.14
CHPF2-202ENST00000465601 XRRA1Q6P2D8 792 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 WASF1Q92558 559 aa14.16□□□□□ -0.14
CHPF2-202ENST00000465601 TSEN34Q9BSV6 310 aaKnown RBP14.16□□□□□ -0.14
CHPF2-202ENST00000465601 SORBS3O60504 671 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 STAM2O75886 525 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 CST5P28325 142 aaPredicted RBP14.15□□□□□ -0.14
CHPF2-202ENST00000465601 ACLYP53396 1101 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 FOSBP53539 338 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 ATN1P54259 1190 aaPredicted RBP14.15□□□□□ -0.14
CHPF2-202ENST00000465601 NKX3-2P78367 333 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 SP2Q02086 613 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 SEMA3FQ13275 785 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 KCNV1Q6PIU1 500 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 PCSK9Q8NBP7 692 aaKnown RBP14.15□□□□□ -0.14
CHPF2-202ENST00000465601 DPF3Q92784 378 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 TMX3Q96JJ7 454 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 INPP4AQ96PE3 977 aaPredicted RBP14.15□□□□□ -0.14
CHPF2-202ENST00000465601 LLPHQ9BRT6 129 aaKnown RBP14.15□□□□□ -0.14
CHPF2-202ENST00000465601 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 PHF24Q9UPV7 400 aa14.15□□□□□ -0.14
CHPF2-202ENST00000465601 SPATA31C2B4DYI2 1134 aa14.14□□□□□ -0.15
CHPF2-202ENST00000465601 GH1P01241 217 aa14.14□□□□□ -0.15
CHPF2-202ENST00000465601 ASGR1P07306 291 aa14.14□□□□□ -0.15
CHPF2-202ENST00000465601 XBP1P17861 261 aa14.14□□□□□ -0.15
CHPF2-202ENST00000465601 ITGB5P18084 799 aa14.14□□□□□ -0.15
CHPF2-202ENST00000465601 ICAM3P32942 547 aa14.14□□□□□ -0.15
CHPF2-202ENST00000465601 SREBF1P36956 1147 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms