RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 QRICH1Q2TAL8 776 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 ENAHQ8N8S7 591 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-207ENST00000465209 ESR2Q92731 530 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-207ENST00000465209 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
COL11A1-207ENST00000465209 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 KDM4AO75164 1064 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 RGS20O76081 388 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 F2P00734 622 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 GH1P01241 217 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 DEFB103AP81534 67 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 GRB10Q13322 594 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 TRIM71Q2Q1W2 868 aaKnown RBP12.8□□□□□ -0.36
COL11A1-207ENST00000465209 ASPRV1Q53RT3 343 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
COL11A1-207ENST00000465209 RETREG2Q8NC44 543 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
COL11A1-207ENST00000465209 WNT8BQ93098 351 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 IWS1Q96ST2 819 aa12.8□□□□□ -0.36
COL11A1-207ENST00000465209 DDX41Q9UJV9 622 aaKnown RBP12.8□□□□□ -0.36
COL11A1-207ENST00000465209 DOCK5Q9H7D0 1870 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 TRIM6-TRIM34B2RNG4 842 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 B4DLN1 442 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 B4E1Z4 1266 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 PPP1R11O60927 126 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-207ENST00000465209 CKBP12277 381 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 SELPP16109 830 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 HSD17B4P51659 736 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 MRPL12P52815 198 aaKnown RBP12.79□□□□□ -0.36
COL11A1-207ENST00000465209 HIC1Q14526 733 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 MBTPS1Q14703 1052 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 PLEKHM2Q8IWE5 1019 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 ARNTL2Q8WYA1 636 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 MTMR8Q96EF0 704 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 FTOQ9C0B1 505 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL11A1-207ENST00000465209 IL25Q9H293 177 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-207ENST00000465209 JMJD4Q9H9V9 463 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 PXMP2Q9NR77 195 aa12.79□□□□□ -0.36
COL11A1-207ENST00000465209 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
COL11A1-207ENST00000465209 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 ZNF213O14771 459 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-207ENST00000465209 TLL1O43897 1013 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 STXBP2Q15833 593 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 AAK1Q2M2I8 961 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 IQCA1Q86XH1 822 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 PPTC7Q8NI37 304 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 RILPL2Q969X0 211 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 ZSCAN10Q96SZ4 725 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-207ENST00000465209 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 HDAC6Q9UBN7 1215 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-207ENST00000465209 COG5Q9UP83 839 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 C5orf42Q9H799 3197 aa12.78□□□□□ -0.36
COL11A1-207ENST00000465209 NLRC5Q86WI3 1866 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 EIF3JO75822 258 aaKnown RBP12.77□□□□□ -0.37
COL11A1-207ENST00000465209 GJB5O95377 273 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 PARNO95453 639 aaKnown RBP12.77□□□□□ -0.37
COL11A1-207ENST00000465209 NR3C2P08235 984 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 ZNF286BP0CG31 522 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.37
COL11A1-207ENST00000465209 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.37
COL11A1-207ENST00000465209 HOXC8P31273 242 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 PSEN2P49810 448 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
COL11A1-207ENST00000465209 SEC23AQ15436 765 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 DGKDQ16760 1214 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 CCDC178Q5BJE1 867 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 CHST3Q7LGC8 479 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 FBXO11Q86XK2 927 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 MCF2L2Q86YR7 1114 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 IL27Q8NEV9 243 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
COL11A1-207ENST00000465209 MRPL11Q9Y3B7 192 aaKnown RBP12.77□□□□□ -0.37
COL11A1-207ENST00000465209 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 PARP1P09874 1014 aaKnown RBP12.76□□□□□ -0.37
COL11A1-207ENST00000465209 KCNJ6P48051 423 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 CHMP4BP1P59074 171 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
COL11A1-207ENST00000465209 NUCB1Q02818 461 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 PTK7Q13308 1070 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 MFSD10Q14728 455 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
COL11A1-207ENST00000465209 KIAA0753Q2KHM9 967 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 HSDL1Q3SXM5 330 aa12.76□□□□□ -0.37
COL11A1-207ENST00000465209 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms