RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	PRKAR2A	P13861	404 aa	Known RBP	27.87	■■■□□ 2.05
RERE-208	ENST00000465125	TRIM32	Q13049	653 aa		27.87	■■■□□ 2.05
RERE-208	ENST00000465125	INF2	Q27J81	1249 aa		27.87	■■■□□ 2.05
RERE-208	ENST00000465125	EEPD1	Q7L9B9	569 aa		27.87	■■■□□ 2.05
RERE-208	ENST00000465125	FBXO16	Q8IX29	292 aa	Predicted RBP	27.87	■■■□□ 2.05
RERE-208	ENST00000465125	NRBP1	Q9UHY1	535 aa		27.87	■■■□□ 2.05
RERE-208	ENST00000465125	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.87	■■■□□ 2.05
RERE-208	ENST00000465125	FAM205C	A6NFA0	338 aa		27.86	■■■□□ 2.05
RERE-208	ENST00000465125	U2AF2	P26368	475 aa	Known RBP eCLIP	27.86	■■■□□ 2.05	6e-8	■□□□□ 9.9
RERE-208	ENST00000465125	MRPS9	P82933	396 aa	Known RBP	27.86	■■■□□ 2.05
RERE-208	ENST00000465125	CACNB2	Q08289	660 aa	Predicted RBP	27.86	■■■□□ 2.05
RERE-208	ENST00000465125	EARS2	Q5JPH6	523 aa	Known RBP	27.86	■■■□□ 2.05
RERE-208	ENST00000465125	MTMR6	Q9Y217	621 aa		27.86	■■■□□ 2.05
RERE-208	ENST00000465125	MYH7B	A7E2Y1	1941 aa		27.86	■■■□□ 2.05
RERE-208	ENST00000465125	HTT	P42858	3142 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	CYP3A4	P08684	503 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	ZNF76	P36508	570 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	ACVR2B	Q13705	512 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	CRYGN	Q8WXF5	182 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	ZFP91	Q96JP5	570 aa	Predicted RBP	27.85	■■■□□ 2.05
RERE-208	ENST00000465125	MCOLN1	Q9GZU1	580 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	KATNBL1	Q9H079	304 aa		27.85	■■■□□ 2.05
RERE-208	ENST00000465125	CYBA	P13498	195 aa		27.84	■■■□□ 2.05
RERE-208	ENST00000465125	PRAMEF19	Q5SWL8	479 aa		27.84	■■■□□ 2.05
RERE-208	ENST00000465125	MAP3K21	Q5TCX8	1036 aa		27.84	■■■□□ 2.05
RERE-208	ENST00000465125	NEK8	Q86SG6	692 aa		27.84	■■■□□ 2.05
RERE-208	ENST00000465125	USP11	P51784	963 aa		27.83	■■■□□ 2.05
RERE-208	ENST00000465125	GNPTAB	Q3T906	1256 aa		27.83	■■■□□ 2.05
RERE-208	ENST00000465125	FERMT3	Q86UX7	667 aa		27.83	■■■□□ 2.05
RERE-208	ENST00000465125	RTEL1	Q9NZ71	1219 aa		27.83	■■■□□ 2.05
RERE-208	ENST00000465125	ZNF865	P0CJ78	1059 aa	Predicted RBP	27.82	■■■□□ 2.04
RERE-208	ENST00000465125	LETM2	Q2VYF4	491 aa		27.82	■■■□□ 2.04
RERE-208	ENST00000465125	SEPT14	Q6ZU15	432 aa		27.82	■■■□□ 2.04
RERE-208	ENST00000465125	NLRX1	Q86UT6	975 aa		27.82	■■■□□ 2.04
RERE-208	ENST00000465125	TRPV1	Q8NER1	839 aa		27.82	■■■□□ 2.04
RERE-208	ENST00000465125	INPP4A	Q96PE3	977 aa	Predicted RBP	27.82	■■■□□ 2.04
RERE-208	ENST00000465125	NAP1L4	Q99733	375 aa	Known RBP	27.82	■■■□□ 2.04
RERE-208	ENST00000465125	NOL7	Q9UMY1	257 aa	Known RBP	27.82	■■■□□ 2.04
RERE-208	ENST00000465125	UBIAD1	Q9Y5Z9	338 aa		27.82	■■■□□ 2.04
RERE-208	ENST00000465125	CEP55	Q53EZ4	464 aa		27.81	■■■□□ 2.04
RERE-208	ENST00000465125	BRAP	Q7Z569	592 aa		27.81	■■■□□ 2.04
RERE-208	ENST00000465125	SCFD2	Q8WU76	684 aa		27.81	■■■□□ 2.04
RERE-208	ENST00000465125	MXRA8	Q9BRK3	442 aa		27.81	■■■□□ 2.04
RERE-208	ENST00000465125	KIAA1217	Q5T5P2	1943 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	RGS20	O76081	388 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	ITGB5	P18084	799 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	CNGA1	P29973	690 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	CIITA	P33076	1130 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	CCDC144B	Q3MJ40	725 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	TAPT1	Q6NXT6	567 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	ARMC5	Q96C12	935 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	GPRASP2	Q96D09	838 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	JADE2	Q9NQC1	790 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	PDGFC	Q9NRA1	345 aa		27.8	■■■□□ 2.04
RERE-208	ENST00000465125	ZSCAN22	P10073	491 aa	Predicted RBP	27.79	■■■□□ 2.04
RERE-208	ENST00000465125	GCFC2	P16383	781 aa	Known RBP	27.79	■■■□□ 2.04
RERE-208	ENST00000465125	CCND3	P30281	292 aa	Predicted RBP	27.79	■■■□□ 2.04
RERE-208	ENST00000465125	REST	Q13127	1097 aa		27.79	■■■□□ 2.04
RERE-208	ENST00000465125	MTMR1	Q13613	665 aa		27.79	■■■□□ 2.04
RERE-208	ENST00000465125	MOXD1	Q6UVY6	613 aa		27.79	■■■□□ 2.04
RERE-208	ENST00000465125	NIPA1	Q7RTP0	329 aa		27.79	■■■□□ 2.04
RERE-208	ENST00000465125	IPO9	Q96P70	1041 aa	Known RBP	27.79	■■■□□ 2.04
RERE-208	ENST00000465125	HMX1	Q9NP08	348 aa	Predicted RBP	27.79	■■■□□ 2.04
RERE-208	ENST00000465125	FAM184B	Q9ULE4	1060 aa		27.79	■■■□□ 2.04
RERE-208	ENST00000465125	MRVI1	Q9Y6F6	885 aa		27.79	■■■□□ 2.04
RERE-208	ENST00000465125	RBM47	A0AV96	593 aa	Known RBP	27.78	■■■□□ 2.04
RERE-208	ENST00000465125	FAM86B1	E9PN63	330 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	FIBP	O43427	364 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	EDIL3	O43854	480 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	TDP2	O95551	362 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	FAM86B2	P0C5J1	330 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	AKR1A1	P14550	325 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	ATP2B1	P20020	1258 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	ADCYAP1R1	P41586	468 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	TRAPPC10	P48553	1259 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	SET	Q01105	290 aa	Predicted RBP	27.78	■■■□□ 2.04
RERE-208	ENST00000465125	PKP1	Q13835	747 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	TTLL4	Q14679	1199 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	KCNV1	Q6PIU1	500 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	CYP2W1	Q8TAV3	490 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	ZNF333	Q96JL9	665 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	CDHR1	Q96JP9	859 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	WDR11	Q9BZH6	1224 aa		27.78	■■■□□ 2.04
RERE-208	ENST00000465125	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	27.78	■■■□□ 2.04
RERE-208	ENST00000465125	MEIS1	O00470	390 aa		27.77	■■■□□ 2.04
RERE-208	ENST00000465125	SEPT4	O43236	478 aa		27.77	■■■□□ 2.04
RERE-208	ENST00000465125	CCNT1	O60563	726 aa	Known RBP	27.77	■■■□□ 2.04
RERE-208	ENST00000465125	ICAM3	P32942	547 aa		27.77	■■■□□ 2.04
RERE-208	ENST00000465125	PRR16	Q569H4	304 aa		27.77	■■■□□ 2.04
RERE-208	ENST00000465125	FOXD4L5	Q5VV16	416 aa	Predicted RBP	27.77	■■■□□ 2.04
RERE-208	ENST00000465125	IQSEC1	Q6DN90	963 aa		27.77	■■■□□ 2.04
RERE-208	ENST00000465125	PLA2G4D	Q86XP0	818 aa		27.77	■■■□□ 2.04
RERE-208	ENST00000465125	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	27.77	■■■□□ 2.04
RERE-208	ENST00000465125	IGLV3-22	A0A075B6J6	115 aa		27.76	■■■□□ 2.03
RERE-208	ENST00000465125	CYP3A7-CYP3A51P	A0A087WV96	503 aa		27.76	■■■□□ 2.03
RERE-208	ENST00000465125	MYC	P01106	439 aa	Predicted RBP	27.76	■■■□□ 2.03
RERE-208	ENST00000465125	CYP3A7	P24462	503 aa		27.76	■■■□□ 2.03
RERE-208	ENST00000465125	TNFAIP2	Q03169	654 aa		27.76	■■■□□ 2.03
RERE-208	ENST00000465125	RILPL1	Q5EBL4	403 aa		27.76	■■■□□ 2.03
RERE-208	ENST00000465125	PPP4R3A	Q6IN85	833 aa		27.76	■■■□□ 2.03

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