RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 ARGLU1Q9NWB6 273 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 PVALEFA0A1B0GWK0 134 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 ECE2O60344 883 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 CHMP4BP1P59074 171 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 BMS1Q14692 1282 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 MEA1Q16626 185 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 CCDC17Q96LX7 622 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 PCDHA1Q9Y5I3 950 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 EPHB6O15197 1021 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 EHHADHQ08426 723 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 SLFN13Q68D06 897 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 FAM114A1Q8IWE2 563 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 RABGGTAQ92696 567 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 NAPGQ99747 312 aaPredicted RBP20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 FGFBP2Q9BYJ0 223 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 PCDHA12Q9UN75 941 aa20.83■□□□□ 0.93
TSPAN4-210ENST00000464987 MARCH6O60337 910 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 PLA2G4AP47712 749 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 JAG1P78504 1218 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 CDC37Q16543 378 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 GPIHBP1Q8IV16 184 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 DNAJC19Q96DA6 116 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 RCCD1A6NED2 376 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 E9PMD0 336 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 SASH3O75995 380 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 PPP1R2P41236 205 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 CC2D1AQ6P1N0 951 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 ERGIC2Q96RQ1 377 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
TSPAN4-210ENST00000464987 ENC1O14682 589 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 PLEKP08567 350 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 CHRNA5P30532 468 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 CACNB1Q02641 598 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 TSR1Q2NL82 804 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 STRIP1Q5VSL9 837 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 GUF1Q8N442 669 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 MKL1Q969V6 931 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 NHEJ1Q9H9Q4 299 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 SSBP05455 408 aaKnown RBP eCLIP20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 RXRBP28702 533 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 STAT3P40763 770 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 NUP58Q9BVL2 599 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 IDI2Q9BXS1 227 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 ANO3Q9BYT9 981 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 LACRTQ9GZZ8 138 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 ANKZF1Q9H8Y5 726 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 TBC1D7Q9P0N9 293 aa20.81■□□□□ 0.92
TSPAN4-210ENST00000464987 MYH10P35580 1976 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 NPHP3-ACAD11A0A0J9YXS1 232 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 MEIS2O14770 477 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 PLSCR1O15162 318 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 ZBED6P86452 979 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 AMPD2Q01433 879 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 COASYQ13057 564 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 VWA3BQ502W6 1294 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 LRRC55Q6ZSA7 311 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 DHX36Q9H2U1 1008 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 TDRD3Q9H7E2 651 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 KANSL2Q9H9L4 492 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 NYAP2Q9P242 653 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 HDAC6Q9UBN7 1215 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 KIAA1024Q9UPX6 916 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 POTEB3A0JP26 581 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 POTECB2RU33 542 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 SOCS7O14512 581 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 TBC1D8O95759 1140 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 CYP27A1Q02318 531 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 ICA1Q05084 483 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 AOC3Q16853 763 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 NCAPH2Q6IBW4 605 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 TATDN1Q6P1N9 297 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 POTEBQ6S5H4 581 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 CCDC155Q8N6L0 562 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 NDST4Q9H3R1 872 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 MYO1AQ9UBC5 1043 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 SIK3Q9Y2K2 1263 aa20.8■□□□□ 0.92
TSPAN4-210ENST00000464987 RAD51AP2Q09MP3 1159 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 RRP1BQ14684 758 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 USH1GQ495M9 461 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 CCDC122Q5T0U0 273 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 CEP112Q8N8E3 955 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 RETREG2Q8NC44 543 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 HAUS4Q9H6D7 363 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 FAM207AQ9NSI2 230 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 DUSP10Q9Y6W6 482 aa20.79■□□□□ 0.92
TSPAN4-210ENST00000464987 F5H6K3 240 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 GCFC2P16383 781 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 KLRC3Q07444 240 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 FKBP15Q5T1M5 1219 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 DCAF4Q8WV16 495 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 PNKPQ96T60 521 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 GTPBP4Q9BZE4 634 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 KCNMB3Q9NPA1 279 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 ZNF263O14978 683 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 KRT26Q7Z3Y9 468 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 PANK4Q9NVE7 773 aa20.78■□□□□ 0.92
TSPAN4-210ENST00000464987 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
TSPAN4-210ENST00000464987 MYO6Q9UM54 1294 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms