RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PLEKHA8P1O95397 391 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 ACRP10323 421 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 RXRAP19793 462 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 TMEM240Q5SV17 173 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 C16orf59Q7L2K0 433 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 FCHSD1Q86WN1 690 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 IL31RAQ8NI17 732 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 PPP1R13LQ8WUF5 828 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 RRP36Q96EU6 259 aaKnown RBP29.92■■■□□ 2.38
U2AF1-206ENST00000464750 FAM161BQ96MY7 647 aa29.92■■■□□ 2.38
U2AF1-206ENST00000464750 DDX41Q9UJV9 622 aaKnown RBP29.92■■■□□ 2.38
U2AF1-206ENST00000464750 SUPT20HL2P0C7V6 817 aa29.91■■■□□ 2.38
U2AF1-206ENST00000464750 GNAQP50148 359 aa29.91■■■□□ 2.38
U2AF1-206ENST00000464750 PSRC1Q6PGN9 363 aaPredicted RBP29.91■■■□□ 2.38
U2AF1-206ENST00000464750 LZTS2Q9BRK4 669 aa29.91■■■□□ 2.38
U2AF1-206ENST00000464750 STXBP5LQ9Y2K9 1186 aa29.91■■■□□ 2.38
U2AF1-206ENST00000464750 CALM1P0DP23 149 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 CALM2P0DP24 149 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 CALM3P0DP25 149 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 SMARCA1P28370 1054 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 CCL23P55773 120 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 NFRKBQ6P4R8 1299 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 RAB11FIP4Q86YS3 637 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 GUCD1Q96NT3 240 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 WNT8AQ9H1J5 351 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 IL23AQ9NPF7 189 aa29.9■■■□□ 2.38
U2AF1-206ENST00000464750 SEC63Q9UGP8 760 aaKnown RBP29.9■■■□□ 2.38
U2AF1-206ENST00000464750 TANC1Q9C0D5 1861 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 RGS20O76081 388 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 CYP2C9P11712 490 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 CCND2P30279 289 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 ZNF365Q70YC5 407 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 VSIG10LQ86VR7 867 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 SRBD1Q8N5C6 995 aaKnown RBP29.89■■■□□ 2.38
U2AF1-206ENST00000464750 SLC12A7Q9Y666 1083 aa29.89■■■□□ 2.38
U2AF1-206ENST00000464750 CHMP4BP1P59074 171 aa29.88■■■□□ 2.37
U2AF1-206ENST00000464750 EMID1Q96A84 441 aaPredicted RBP29.88■■■□□ 2.37
U2AF1-206ENST00000464750 NEK1Q96PY6 1258 aa29.88■■■□□ 2.37
U2AF1-206ENST00000464750 PTPN11Q06124 597 aaPredicted RBP29.87■■■□□ 2.37
U2AF1-206ENST00000464750 SGMS1Q86VZ5 419 aa29.87■■■□□ 2.37
U2AF1-206ENST00000464750 CMTR1Q8N1G2 835 aaKnown RBP29.87■■■□□ 2.37
U2AF1-206ENST00000464750 SCN5AQ14524 2016 aa29.87■■■□□ 2.37
U2AF1-206ENST00000464750 FRMPD4Q14CM0 1322 aa29.87■■■□□ 2.37
U2AF1-206ENST00000464750 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-206ENST00000464750 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-206ENST00000464750 CASTP20810 708 aaKnown RBP29.86■■■□□ 2.37
U2AF1-206ENST00000464750 LAMC2Q13753 1193 aa29.86■■■□□ 2.37
U2AF1-206ENST00000464750 DGKDQ16760 1214 aa29.86■■■□□ 2.37
U2AF1-206ENST00000464750 RASIP1Q5U651 963 aa29.86■■■□□ 2.37
U2AF1-206ENST00000464750 KCNV1Q6PIU1 500 aa29.86■■■□□ 2.37
U2AF1-206ENST00000464750 MICU3Q86XE3 530 aa29.86■■■□□ 2.37
U2AF1-206ENST00000464750 DHX37Q8IY37 1157 aaKnown RBP29.86■■■□□ 2.37
U2AF1-206ENST00000464750 ZFP91Q96JP5 570 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-206ENST00000464750 PPTC7Q8NI37 304 aa29.85■■■□□ 2.37
U2AF1-206ENST00000464750 KAT2BQ92831 832 aa29.85■■■□□ 2.37
U2AF1-206ENST00000464750 SCLYQ96I15 445 aa29.85■■■□□ 2.37
U2AF1-206ENST00000464750 TTYH1Q9H313 450 aaPredicted RBP29.85■■■□□ 2.37
U2AF1-206ENST00000464750 TMTC3Q6ZXV5 915 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 RASEFQ8IZ41 740 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 SMARCC2Q8TAQ2 1214 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 CUL5Q93034 780 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 TCEANC2Q96MN5 208 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 SEMA6BQ9H3T3 888 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 NOD1Q9Y239 953 aa29.84■■■□□ 2.37
U2AF1-206ENST00000464750 GBF1Q92538 1859 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 DOCK5Q9H7D0 1870 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 SORBS3O60504 671 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 GGPS1O95749 300 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 UBA1P22314 1058 aaKnown RBP29.83■■■□□ 2.37
U2AF1-206ENST00000464750 DNAJB2P25686 324 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 ADCK5Q3MIX3 580 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 FANCBQ8NB91 859 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 HERVK_113Q902F9 699 aa29.83■■■□□ 2.37
U2AF1-206ENST00000464750 TMEM265A0A087WTH1 108 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 FGBP02675 491 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 ZNF286BP0CG31 522 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 KRT32Q14532 448 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 TSGA10IPQ3SY00 556 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 CELF3Q5SZQ8 465 aaKnown RBP29.82■■■□□ 2.36
U2AF1-206ENST00000464750 USP17L6PQ6QN14 398 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 SYNE3Q6ZMZ3 975 aa29.82■■■□□ 2.36
U2AF1-206ENST00000464750 DHX32Q7L7V1 743 aaKnown RBP29.82■■■□□ 2.36
U2AF1-206ENST00000464750 GPKOWQ92917 476 aaPredicted RBP eCLIP29.82■■■□□ 2.36
U2AF1-206ENST00000464750 MTIF3Q9H2K0 278 aaKnown RBP29.82■■■□□ 2.36
U2AF1-206ENST00000464750 TRIP12Q14669 1992 aaPredicted RBP29.82■■■□□ 2.36
U2AF1-206ENST00000464750 hCG_1642624A0A1W2PR95 340 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 PIK3CDO00329 1044 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 TGFB3P10600 412 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 MRPS9P82933 396 aaKnown RBP29.81■■■□□ 2.36
U2AF1-206ENST00000464750 EXOSC10Q01780 885 aaKnown RBP29.81■■■□□ 2.36
U2AF1-206ENST00000464750 SP2Q02086 613 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 GNPTABQ3T906 1256 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 MYSM1Q5VVJ2 828 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 APOA5Q6Q788 366 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 SESTD1Q86VW0 696 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 RPUSD2Q8IZ73 545 aaKnown RBP29.81■■■□□ 2.36
U2AF1-206ENST00000464750 CCDC82Q8N4S0 544 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 SPATA33Q96N06 139 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 KATNAL1Q9BW62 490 aa29.81■■■□□ 2.36
U2AF1-206ENST00000464750 CXXC1Q9P0U4 656 aaPredicted RBP29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms