RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 TMC6Q7Z403 805 aa6.8□□□□□ -1.32
USP25-207ENST00000464435 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
USP25-207ENST00000464435 B8ZZF3 427 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 NPHS1O60500 1241 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 CDR1P51861 262 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 CAP1Q01518 475 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 CYP4F3Q08477 520 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 PLEKHN1Q494U1 663 aaPredicted RBP6.79□□□□□ -1.32
USP25-207ENST00000464435 DALRD3Q5D0E6 543 aaKnown RBP6.79□□□□□ -1.32
USP25-207ENST00000464435 TCERG1LQ5VWI1 586 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 LZTR1Q8N653 840 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 NETO2Q8NC67 525 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 DHRS4Q9BTZ2 278 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 NCOA5Q9HCD5 579 aaKnown RBP6.79□□□□□ -1.32
USP25-207ENST00000464435 PCDHA5Q9Y5H7 936 aa6.79□□□□□ -1.32
USP25-207ENST00000464435 BLACEA4D250 179 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 DLX3O60479 287 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 RAPGEF3O95398 923 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 GLI4P10075 376 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 PFKLP17858 780 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 NCLP19338 710 aaKnown RBP6.78□□□□□ -1.32
USP25-207ENST00000464435 HOXC12P31275 282 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 BUD31P41223 144 aaPredicted RBP6.78□□□□□ -1.32
USP25-207ENST00000464435 GFRA1P56159 465 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 SLC9A5Q14940 896 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 PRSS53Q2L4Q9 553 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 ZC3H12BQ5HYM0 836 aaKnown RBP6.78□□□□□ -1.32
USP25-207ENST00000464435 NSMFQ6X4W1 530 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 FILIP1Q7Z7B0 1213 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 RNF38Q9H0F5 515 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 IRF2BPLQ9H1B7 796 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
USP25-207ENST00000464435 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP25-207ENST00000464435 NUDT5Q9UKK9 219 aa6.78□□□□□ -1.32
USP25-207ENST00000464435 C6orf222P0C671 652 aaPredicted RBP6.77□□□□□ -1.33
USP25-207ENST00000464435 SUMO1P63165 101 aaKnown RBP6.77□□□□□ -1.33
USP25-207ENST00000464435 RNF187Q5TA31 235 aaPredicted RBP6.77□□□□□ -1.33
USP25-207ENST00000464435 E4F1Q66K89 784 aaPredicted RBP6.77□□□□□ -1.33
USP25-207ENST00000464435 IGDCC3Q8IVU1 814 aa6.77□□□□□ -1.33
USP25-207ENST00000464435 SYNPOQ8N3V7 929 aa6.77□□□□□ -1.33
USP25-207ENST00000464435 TMEM145Q8NBT3 493 aa6.77□□□□□ -1.33
USP25-207ENST00000464435 DACT3Q96B18 629 aaPredicted RBP6.77□□□□□ -1.33
USP25-207ENST00000464435 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
USP25-207ENST00000464435 CLUHP3Q96NS8 147 aa6.77□□□□□ -1.33
USP25-207ENST00000464435 ZBTB7AO95365 584 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 CPP00450 1065 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 SCG5P05408 212 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 SNRPB2P08579 225 aaKnown RBP6.76□□□□□ -1.33
USP25-207ENST00000464435 EPHB3P54753 998 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 SCRN1Q12765 414 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 PABPC4Q13310 644 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP25-207ENST00000464435 SSPNQ14714 243 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 NTRK3Q16288 839 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 TTLL10Q6ZVT0 673 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 SCUBE1Q8IWY4 988 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 DHX37Q8IY37 1157 aaKnown RBP6.76□□□□□ -1.33
USP25-207ENST00000464435 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 PEX11GQ96HA9 241 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
USP25-207ENST00000464435 DBR1Q9UK59 544 aaKnown RBP6.76□□□□□ -1.33
USP25-207ENST00000464435 C7orf72A4D263 438 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 F8W031 263 aaPredicted RBP6.75□□□□□ -1.33
USP25-207ENST00000464435 PLD2O14939 933 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 BUB1BO60566 1050 aaPredicted RBP6.75□□□□□ -1.33
USP25-207ENST00000464435 PI3P19957 117 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 IGFBP6P24592 240 aaPredicted RBP6.75□□□□□ -1.33
USP25-207ENST00000464435 ECI1P42126 302 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 KCNJ6P48051 423 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 TESK1Q15569 626 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 PTPROQ16827 1216 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 DENND5AQ6IQ26 1287 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 CNKSR3Q6P9H4 555 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 FAM129CQ86XR2 697 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 CPNE8Q86YQ8 564 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 NIM1KQ8IY84 436 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
USP25-207ENST00000464435 PLAAQ9Y263 795 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 PRKAB1Q9Y478 270 aa6.75□□□□□ -1.33
USP25-207ENST00000464435 CCDC163A0A0D9SF12 145 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 PPM1GO15355 546 aaPredicted RBP6.74□□□□□ -1.33
USP25-207ENST00000464435 DNAJC6O75061 913 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 NCAM1P13591 858 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 PLS3P13797 630 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 HSP90B1P14625 803 aaKnown RBP6.74□□□□□ -1.33
USP25-207ENST00000464435 FBLN1P23142 703 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 MASP1P48740 699 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 AFF3P51826 1226 aaKnown RBP6.74□□□□□ -1.33
USP25-207ENST00000464435 GTF2A2P52657 109 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 PRR5P85299 388 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 MAP4K2Q12851 820 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 SLC35F1Q5T1Q4 408 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 KRTAP5-3Q6L8H2 238 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 TMEFF1Q8IYR6 380 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 NPLOC4Q8TAT6 608 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 KCTD13Q8WZ19 329 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 NINJ1Q92982 152 aa6.74□□□□□ -1.33
USP25-207ENST00000464435 MFSD3Q96ES6 412 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms