RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 CPDO75976 1380 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 LRRC53A6NM62 1247 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 ATP8B1O43520 1251 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 PLTPP55058 493 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 PFKFB3Q16875 520 aaPredicted RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 DENND2CQ68D51 928 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 FBXO11Q86XK2 927 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 NOA1Q8NC60 698 aaKnown RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 TBC1D22AQ8WUA7 517 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 SERPINB13Q9UIV8 391 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 TUBE1Q9UJT0 475 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 TSKSQ9UJT2 592 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 PIK3C2BO00750 1634 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 ADAMTS13Q76LX8 1427 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 CLRN2A0PK11 232 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 GGCXP38435 758 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 TRAF1Q13077 416 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 NAP1L3Q99457 506 aaPredicted RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 EMILIN3Q9NT22 766 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 COL4A3BPQ9Y5P4 624 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 E9PMD0 336 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 TDP2O95551 362 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 NNTQ13423 1086 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 POTEDQ86YR6 584 aa9.95□□□□□ -0.82
HPS4-208ENST00000464362 FAM84BQ96KN1 310 aaPredicted RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 NUCKS1Q9H1E3 243 aaKnown RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.95□□□□□ -0.82
HPS4-208ENST00000464362 TESPA1A2RU30 521 aaPredicted RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 ATP2A1O14983 1001 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 TRIM66O15016 1216 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 ALAS1P13196 640 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 ZKSCAN8Q15776 578 aaPredicted RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 PIGOQ8TEQ8 1089 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 STMN4Q9H169 189 aaPredicted RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 BHMT2Q9H2M3 363 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 STK36Q9NRP7 1315 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 N4BP1O75113 896 aaKnown RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 PCP11498 1178 aaKnown RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 CD19P15391 556 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 TNNI1P19237 187 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 VSIG1Q86XK7 387 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 CEP95Q96GE4 821 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 MMS19Q96T76 1030 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 BSDC1Q9NW68 430 aaPredicted RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 K7ENM7 598 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 CLTAP09496 248 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 BCRP11274 1271 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 KRT15P19012 456 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 E2F5Q15329 346 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 GALNT17Q6IS24 598 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 INTS8Q75QN2 995 aaKnown RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 KCNB2Q92953 911 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 MAGOHBQ96A72 148 aaKnown RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 NAP1L4Q99733 375 aaKnown RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 ADD3Q9UEY8 706 aaKnown RBP9.94□□□□□ -0.82
HPS4-208ENST00000464362 RABGAP1Q9Y3P9 1069 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 CD2APQ9Y5K6 639 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 KDM3AQ9Y4C1 1321 aa9.94□□□□□ -0.82
HPS4-208ENST00000464362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 KLK7P49862 253 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 EPHB4P54760 987 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 SNX1Q13596 522 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 WDR44Q5JSH3 913 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 ARL6IP4Q66PJ3 421 aaKnown RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 AK8Q96MA6 479 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 THAP9Q9H5L6 903 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 PALMO75781 387 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 PLA2G4BP0C869 781 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 SMTNP53814 917 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 DHX9Q08211 1270 aaKnown RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 STK4Q13043 487 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 TRIM28Q13263 835 aaKnown RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 ALX1Q15699 326 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 ALKBH5Q6P6C2 394 aaKnown RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 FOXP4Q8IVH2 680 aaPredicted RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 CACNA2D3Q8IZS8 1091 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 SYCE1Q8N0S2 351 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.93□□□□□ -0.82
HPS4-208ENST00000464362 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 XDHP47989 1333 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 PTPRUQ92729 1446 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 FRMD3A2A2Y4 597 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 GOLGA8KD6RF30 607 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 GYPCP04921 128 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 ARHGAP25P42331 645 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
HPS4-208ENST00000464362 FAM102BQ5T8I3 360 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 TBC1D9BQ66K14 1250 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 ANKRD40Q6AI12 368 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 CCDC170Q8IYT3 715 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 RETREG2Q8NC44 543 aa9.93□□□□□ -0.82
HPS4-208ENST00000464362 TBC1D31Q96DN5 1066 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms