RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ETFBP38117 255 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 KCNJ6P48051 423 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 PLP2Q04941 152 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 CYP4F3Q08477 520 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 UBXN11Q5T124 520 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 PRRT2Q7Z6L0 340 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-208ENST00000464001 ZC3H18Q86VM9 953 aaKnown RBP6.79□□□□□ -1.32
ITGB1-208ENST00000464001 SPATA6Q9NWH7 488 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-208ENST00000464001 CCDC9Q9Y3X0 531 aaKnown RBP6.79□□□□□ -1.32
ITGB1-208ENST00000464001 TBX1O43435 398 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 C8BP07358 591 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 BCL6P41182 706 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 GJA9P57773 515 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 ARID5AQ03989 594 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 RTP5Q14D33 572 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 ACBD5Q5T8D3 534 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-208ENST00000464001 CD300LDQ6UXZ3 194 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 MILR1Q7Z6M3 343 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 TMEM169Q96HH4 297 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 BDH2Q9BUT1 245 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 NGRNQ9NPE2 291 aaKnown RBP6.78□□□□□ -1.32
ITGB1-208ENST00000464001 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-208ENST00000464001 COA3Q9Y2R0 106 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-208ENST00000464001 X6R8D5 127 aa6.78□□□□□ -1.32
ITGB1-208ENST00000464001 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-208ENST00000464001 FPR2P25090 351 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 SMAD4Q13485 552 aaKnown RBP6.77□□□□□ -1.33
ITGB1-208ENST00000464001 TESK1Q15569 626 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 EEPD1Q7L9B9 569 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 CCDC103Q8IW40 242 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 PPIL6Q8IXY8 311 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 Q8N1Y9 231 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 KREMEN2Q8NCW0 462 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 GORASP1Q9BQQ3 440 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 C11orf84Q9BUA3 381 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-208ENST00000464001 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 EPN3Q9H201 632 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 PALD1Q9ULE6 856 aa6.77□□□□□ -1.33
ITGB1-208ENST00000464001 R3HCC1Q9Y3T6 440 aaKnown RBP6.77□□□□□ -1.33
ITGB1-208ENST00000464001 H7BY64 318 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 AGRPO00253 132 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 NOBOXO60393 691 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 LTBRP36941 435 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 CHRNA2Q15822 529 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 DBX2Q6ZNG2 339 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 FERMT3Q86UX7 667 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 FAM126BQ8IXS8 530 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 TTLL6Q8N841 843 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 KYQ8NBH2 561 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 RCBTB1Q8NDN9 531 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 MICAL1Q8TDZ2 1067 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 CHAMP1Q96JM3 812 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 ZNF408Q9H9D4 720 aa6.76□□□□□ -1.33
ITGB1-208ENST00000464001 ARNTLO00327 626 aa6.75□□□□□ -1.33
ITGB1-208ENST00000464001 FGRP09769 529 aa6.75□□□□□ -1.33
ITGB1-208ENST00000464001 GFRA1P56159 465 aa6.75□□□□□ -1.33
ITGB1-208ENST00000464001 LSAMPQ13449 338 aa6.75□□□□□ -1.33
ITGB1-208ENST00000464001 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
ITGB1-208ENST00000464001 SPATS1Q496A3 300 aa6.75□□□□□ -1.33
ITGB1-208ENST00000464001 MRM1Q6IN84 353 aaKnown RBP6.75□□□□□ -1.33
ITGB1-208ENST00000464001 ZNF761Q86XN6 746 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-208ENST00000464001 DDX1Q92499 740 aaKnown RBP6.75□□□□□ -1.33
ITGB1-208ENST00000464001 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
ITGB1-208ENST00000464001 CNOT11Q9UKZ1 510 aaKnown RBP6.75□□□□□ -1.33
ITGB1-208ENST00000464001 GJB6O95452 261 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 RPL13P26373 211 aaKnown RBP6.74□□□□□ -1.33
ITGB1-208ENST00000464001 THBS2P35442 1172 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 PRSS53Q2L4Q9 553 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 NLRP10Q86W26 655 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 FAM26EQ8N5C1 309 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 TMEM145Q8NBT3 493 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 ADAMTS17Q8TE56 1095 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 TINF2Q9BSI4 451 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 LNPKQ9C0E8 428 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 PCDHA2Q9Y5H9 948 aa6.74□□□□□ -1.33
ITGB1-208ENST00000464001 HGSO14964 777 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-208ENST00000464001 ADRB1P08588 477 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 CNR2P34972 360 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 NKX3-2P78367 333 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 KIAA2012Q0VF49 1180 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 MCF2L2Q86YR7 1114 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 BORCS6Q96GS4 357 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 CLDND1Q9NY35 253 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 ZNF652Q9Y2D9 606 aa6.73□□□□□ -1.33
ITGB1-208ENST00000464001 K7ESM1 405 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 DNAJA1P31689 397 aaKnown RBP6.72□□□□□ -1.33
ITGB1-208ENST00000464001 STAT5AP42229 794 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 ITGA1P56199 1179 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 EFEMP1Q12805 493 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 SLC10A6Q3KNW5 377 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 SLC35F1Q5T1Q4 408 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 KCTD13Q8WZ19 329 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 SYT3Q9BQG1 590 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 DUSP10Q9Y6W6 482 aa6.72□□□□□ -1.33
ITGB1-208ENST00000464001 DGKIO75912 1065 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 LCP1P13796 627 aa6.71□□□□□ -1.34
ITGB1-208ENST00000464001 MAP4K2Q12851 820 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms