RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SPDYE3A6NKU9 549 aa21.69■■□□□ 1.06
LMNB1-204ENST00000463908 FOSP01100 380 aaPredicted RBP21.69■■□□□ 1.06
LMNB1-204ENST00000463908 PTGS1P23219 599 aa21.69■■□□□ 1.06
LMNB1-204ENST00000463908 CUL4AQ13619 759 aa21.69■■□□□ 1.06
LMNB1-204ENST00000463908 LENG1Q96BZ8 264 aaPredicted RBP21.69■■□□□ 1.06
LMNB1-204ENST00000463908 AKR1A1P14550 325 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 SMPD1P17405 629 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 PCNX4Q63HM2 1172 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 IQSEC1Q6DN90 963 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 DAGLBQ8NCG7 672 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 ANO3Q9BYT9 981 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 RTEL1Q9NZ71 1219 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 OGDHLQ9ULD0 1010 aa21.68■■□□□ 1.06
LMNB1-204ENST00000463908 EDIL3O43854 480 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 ARIH2O95376 493 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 CCND2P30279 289 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 HMGN5P82970 282 aaKnown RBP21.67■■□□□ 1.06
LMNB1-204ENST00000463908 TNFAIP2Q03169 654 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 AP3B2Q13367 1082 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 GALNT17Q6IS24 598 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 SEPT14Q6ZU15 432 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 BLIDQ8IZY5 108 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 REXO1Q8N1G1 1221 aaKnown RBP21.67■■□□□ 1.06
LMNB1-204ENST00000463908 BICD2Q8TD16 824 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 OXER1Q8TDS5 423 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 CRYGNQ8WXF5 182 aa21.67■■□□□ 1.06
LMNB1-204ENST00000463908 GNEQ9Y223 722 aaKnown RBP21.67■■□□□ 1.06
LMNB1-204ENST00000463908 KIAA0100Q14667 2235 aaKnown RBP21.66■■□□□ 1.06
LMNB1-204ENST00000463908 MSCO60682 206 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 TFRCP02786 760 aaKnown RBP21.66■■□□□ 1.06
LMNB1-204ENST00000463908 XBP1P17861 261 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 MNX1P50219 401 aaPredicted RBP21.66■■□□□ 1.06
LMNB1-204ENST00000463908 FOSBP53539 338 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 KRT40Q6A162 431 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 CCDC62Q6P9F0 684 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 WDR11Q9BZH6 1224 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 LRRC37A2A6NM11 1700 aa21.66■■□□□ 1.06
LMNB1-204ENST00000463908 K7ELQ4 463 aaPredicted RBP21.65■■□□□ 1.06
LMNB1-204ENST00000463908 DUSP11O75319 330 aaKnown RBP21.65■■□□□ 1.06
LMNB1-204ENST00000463908 SREBF1P36956 1147 aa21.65■■□□□ 1.06
LMNB1-204ENST00000463908 IRX5P78411 483 aaPredicted RBP21.65■■□□□ 1.06
LMNB1-204ENST00000463908 GJC2Q5T442 439 aaPredicted RBP21.65■■□□□ 1.06
LMNB1-204ENST00000463908 MCTP2Q6DN12 878 aa21.65■■□□□ 1.06
LMNB1-204ENST00000463908 XRRA1Q6P2D8 792 aa21.65■■□□□ 1.06
LMNB1-204ENST00000463908 SCFD2Q8WU76 684 aa21.65■■□□□ 1.06
LMNB1-204ENST00000463908 RARBP10826 455 aa21.64■■□□□ 1.05
LMNB1-204ENST00000463908 ITGB5P18084 799 aa21.64■■□□□ 1.05
LMNB1-204ENST00000463908 DUSP28Q4G0W2 176 aa21.64■■□□□ 1.05
LMNB1-204ENST00000463908 CYP2W1Q8TAV3 490 aa21.64■■□□□ 1.05
LMNB1-204ENST00000463908 INPP4AQ96PE3 977 aaPredicted RBP21.64■■□□□ 1.05
LMNB1-204ENST00000463908 DDX41Q9UJV9 622 aaKnown RBP21.64■■□□□ 1.05
LMNB1-204ENST00000463908 UBIAD1Q9Y5Z9 338 aa21.64■■□□□ 1.05
LMNB1-204ENST00000463908 SPATA31C2B4DYI2 1134 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 CTAGE5O15320 804 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 ADAMTS4O75173 837 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 STAM2O75886 525 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 PGK1P00558 417 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 MMP1P03956 469 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 CYP3A4P08684 503 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 TXNP10599 105 aaKnown RBP21.63■■□□□ 1.05
LMNB1-204ENST00000463908 GJB2P29033 226 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 SP2Q02086 613 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 SEMA3FQ13275 785 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 LY6KQ17RY6 165 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 FAM184AQ8NB25 1140 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 FBXO18Q8NFZ0 1043 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 COPS5Q92905 334 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 TNFRSF25Q93038 417 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 C8orf76Q96K31 380 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 EHMT1Q9H9B1 1298 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
LMNB1-204ENST00000463908 BTBD18B2RXH4 712 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 DYNC1LI2O43237 492 aaPredicted RBP21.62■■□□□ 1.05
LMNB1-204ENST00000463908 ICAM3P32942 547 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 ARHGAP4P98171 946 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 GUCY1B3Q02153 619 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 TTLL4Q14679 1199 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 EARS2Q5JPH6 523 aaKnown RBP21.62■■□□□ 1.05
LMNB1-204ENST00000463908 UPF3AQ9H1J1 476 aaKnown RBP21.62■■□□□ 1.05
LMNB1-204ENST00000463908 BCAS3Q9H6U6 928 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 Q9Y3F1 56 aa21.62■■□□□ 1.05
LMNB1-204ENST00000463908 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.62■■□□□ 1.05
LMNB1-204ENST00000463908 SYNRGQ9UMZ2 1314 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 MYADML2A6NDP7 307 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 GJA9P57773 515 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 NKX3-2P78367 333 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 NR5A1Q13285 461 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 LRRC41Q15345 812 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 KLHDC9Q8NEP7 349 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 MXRA8Q9BRK3 442 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 JADE2Q9NQC1 790 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 SMC3Q9UQE7 1217 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 MRVI1Q9Y6F6 885 aa21.61■■□□□ 1.05
LMNB1-204ENST00000463908 FAM86B1E9PN63 330 aa21.6■■□□□ 1.05
LMNB1-204ENST00000463908 FAM86B2P0C5J1 330 aa21.6■■□□□ 1.05
LMNB1-204ENST00000463908 CAPN2P17655 700 aa21.6■■□□□ 1.05
LMNB1-204ENST00000463908 KRT2P35908 639 aa21.6■■□□□ 1.05
LMNB1-204ENST00000463908 TRIM29Q14134 588 aa21.6■■□□□ 1.05
LMNB1-204ENST00000463908 CCSAPQ6IQ19 270 aaPredicted RBP21.6■■□□□ 1.05
LMNB1-204ENST00000463908 UBE2Q1Q7Z7E8 422 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms