RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 LIFRP42702 1097 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 KCNV1Q6PIU1 500 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 SESTD1Q86VW0 696 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 ZNF654Q8IZM8 581 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 AFG1LQ8WV93 481 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 VWCEQ96DN2 955 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 FAM161BQ96MY7 647 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 LZTS2Q9BRK4 669 aa23.81■■□□□ 1.4
PDLIM4-205ENST00000463615 PRC1O43663 620 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 FGBP02675 491 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 PFKMP08237 780 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 HOXD8P13378 290 aaPredicted RBP23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 DNAJB2P25686 324 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 PGM5Q15124 567 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 CASC1Q6TDU7 716 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 RPUSD2Q8IZ73 545 aaKnown RBP23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 MTIF3Q9H2K0 278 aaKnown RBP23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 FRMPD4Q14CM0 1322 aa23.8■■□□□ 1.4
PDLIM4-205ENST00000463615 PITPNM1O00562 1244 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 SH2B2O14492 632 aaPredicted RBP23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 TGFB3P10600 412 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 CASTP20810 708 aaKnown RBP23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 KIF5BP33176 963 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 CCL23P55773 120 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 LAMC2Q13753 1193 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 CREB3L3Q68CJ9 461 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 CTCFLQ8NI51 663 aaPredicted RBP23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 KAT2BQ92831 832 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 MRVI1Q9Y6F6 885 aa23.79■■□□□ 1.4
PDLIM4-205ENST00000463615 CYP2C9P11712 490 aa23.78■■□□□ 1.4
PDLIM4-205ENST00000463615 HOXA13P31271 388 aaPredicted RBP23.78■■□□□ 1.4
PDLIM4-205ENST00000463615 GNAQP50148 359 aa23.78■■□□□ 1.4
PDLIM4-205ENST00000463615 DGKDQ16760 1214 aa23.78■■□□□ 1.4
PDLIM4-205ENST00000463615 PPTC7Q8NI37 304 aa23.78■■□□□ 1.4
PDLIM4-205ENST00000463615 RFC2P35250 354 aa23.77■■□□□ 1.4
PDLIM4-205ENST00000463615 CXXC1Q9P0U4 656 aaPredicted RBP23.77■■□□□ 1.4
PDLIM4-205ENST00000463615 STAM2O75886 525 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 CALM1P0DP23 149 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 CALM2P0DP24 149 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 CALM3P0DP25 149 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 CCND2P30279 289 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 COL9A3Q14050 684 aaPredicted RBP23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 FAM47CQ5HY64 1035 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 MYSM1Q5VVJ2 828 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 IL31RAQ8NI17 732 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 TIFAQ96CG3 184 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 PBX4Q9BYU1 374 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 ANO2Q9NQ90 1003 aa23.76■■□□□ 1.39
PDLIM4-205ENST00000463615 HAS3O00219 553 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 PIK3CDO00329 1044 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 PPFIA4O75335 1185 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 F2P00734 622 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 MYCLP12524 364 aaPredicted RBP23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 SGMS1Q86VZ5 419 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 DHX37Q8IY37 1157 aaKnown RBP23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 RRP36Q96EU6 259 aaKnown RBP23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 SCLYQ96I15 445 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 CTAGE1Q96RT6 745 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 MYL10Q9BUA6 226 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 KATNAL1Q9BW62 490 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 CDH23Q9H251 3354 aa23.75■■□□□ 1.39
PDLIM4-205ENST00000463615 CCDC69A6NI79 296 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 RBL2Q08999 1139 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 BFSP2Q13515 415 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 RAB30Q15771 203 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 TSGA10IPQ3SY00 556 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 CELF3Q5SZQ8 465 aaKnown RBP23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 RNF20Q5VTR2 975 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 ZNF576Q9H609 170 aa23.74■■□□□ 1.39
PDLIM4-205ENST00000463615 GRXCR1A8MXD5 290 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 IQCF3P0C7M6 154 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 ICAM3P32942 547 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 PTGISQ16647 500 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 OTOP2Q7RTS6 562 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 FCHSD1Q86WN1 690 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 SRBD1Q8N5C6 995 aaKnown RBP23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 CAGE1Q8TC20 777 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 MYLIPQ8WY64 445 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 INPP4AQ96PE3 977 aaPredicted RBP23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 GTF2IRD1Q9UHL9 959 aa23.73■■□□□ 1.39
PDLIM4-205ENST00000463615 UBA1P22314 1058 aaKnown RBP23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 PBX2P40425 430 aa23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 MRPS9P82933 396 aaKnown RBP23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 SP2Q02086 613 aa23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 GRIN2CQ14957 1233 aa23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 GDF6Q6KF10 455 aaPredicted RBP23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 XRRA1Q6P2D8 792 aa23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 NFXL1Q6ZNB6 911 aa23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 RETREG2Q8NC44 543 aa23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 SEC63Q9UGP8 760 aaKnown RBP23.72■■□□□ 1.39
PDLIM4-205ENST00000463615 TANC1Q9C0D5 1861 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 MEIS2O14770 477 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 PLEKHA8P1O95397 391 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 GGPS1O95749 300 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 PSEN2P49810 448 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 GNPTABQ3T906 1256 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 SKAP1Q86WV1 359 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 CCDC155Q8N6L0 562 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 AFAP1L1Q8TED9 768 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 NOD1Q9Y239 953 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms