RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 TTLL13PA6NNM8 815 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 OPLAHO14841 1288 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 SLC27A2O14975 620 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 PPP1R11O60927 126 aaPredicted RBP13.79□□□□□ -0.2
RTCB-202ENST00000463455 CFBP00751 764 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 CALM1P0DP23 149 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 CALM2P0DP24 149 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 CALM3P0DP25 149 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 PTPN11Q06124 597 aaPredicted RBP13.79□□□□□ -0.2
RTCB-202ENST00000463455 PSRC1Q6PGN9 363 aaPredicted RBP13.79□□□□□ -0.2
RTCB-202ENST00000463455 KCNV1Q6PIU1 500 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 TBC1D5Q92609 795 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
RTCB-202ENST00000463455 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
RTCB-202ENST00000463455 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
RTCB-202ENST00000463455 MTMR10Q9NXD2 777 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 GRIN2DO15399 1336 aa13.79□□□□□ -0.2
RTCB-202ENST00000463455 PRC1O43663 620 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 CYTH3O43739 400 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 GH1P01241 217 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 NR3C2P08235 984 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 TIE1P35590 1138 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 TMEM63BQ5T3F8 832 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 PIGSQ96S52 555 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 ALDH8A1Q9H2A2 487 aaPredicted RBP13.78□□□□□ -0.2
RTCB-202ENST00000463455 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
RTCB-202ENST00000463455 BAZ2BQ9UIF8 2168 aaKnown RBP13.78□□□□□ -0.2
RTCB-202ENST00000463455 CCDC69A6NI79 296 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.21
RTCB-202ENST00000463455 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.21
RTCB-202ENST00000463455 B4GALT4O60513 344 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 STAM2O75886 525 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 TGFB3P10600 412 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
RTCB-202ENST00000463455 PTGS1P23219 599 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 EPHB4P54760 987 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 FRMPD4Q14CM0 1322 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 TSGA10IPQ3SY00 556 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 ZNF697Q5TEC3 545 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 CHST3Q7LGC8 479 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 SGMS1Q86VZ5 419 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 PDCD2LQ9BRP1 358 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 MTIF3Q9H2K0 278 aaKnown RBP13.77□□□□□ -0.21
RTCB-202ENST00000463455 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
RTCB-202ENST00000463455 CDC45O75419 566 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 ARIH2O95376 493 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 MYL3P08590 195 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 PGM5Q15124 567 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 SEPT14Q6ZU15 432 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 SESTD1Q86VW0 696 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
RTCB-202ENST00000463455 NOC4LQ9BVI4 516 aaKnown RBP13.76□□□□□ -0.21
RTCB-202ENST00000463455 IL23AQ9NPF7 189 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
RTCB-202ENST00000463455 DDX41Q9UJV9 622 aaKnown RBP13.76□□□□□ -0.21
RTCB-202ENST00000463455 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
RTCB-202ENST00000463455 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
RTCB-202ENST00000463455 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
RTCB-202ENST00000463455 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 PFKMP08237 780 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 MMP3P08254 477 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 HOXD8P13378 290 aaPredicted RBP13.75□□□□□ -0.21
RTCB-202ENST00000463455 CSF2RAP15509 400 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
RTCB-202ENST00000463455 CCND2P30279 289 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 PSMC6P62333 389 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 KRT32Q14532 448 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 DGKDQ16760 1214 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 TMEM240Q5SV17 173 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 XRRA1Q6P2D8 792 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 NFXL1Q6ZNB6 911 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 Q7L0L9 218 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
RTCB-202ENST00000463455 PPTC7Q8NI37 304 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 COPS5Q92905 334 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
RTCB-202ENST00000463455 KATNAL1Q9BW62 490 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 PPP1R12CQ9BZL4 782 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
RTCB-202ENST00000463455 CYP2C18P33260 490 aa13.74□□□□□ -0.21
RTCB-202ENST00000463455 RFC2P35250 354 aa13.74□□□□□ -0.21
RTCB-202ENST00000463455 RCAN1P53805 252 aa13.74□□□□□ -0.21
RTCB-202ENST00000463455 LY6KQ17RY6 165 aa13.74□□□□□ -0.21
RTCB-202ENST00000463455 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
RTCB-202ENST00000463455 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms