RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 CTCFP49711 727 aaPredicted RBP15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 RILPL1Q5EBL4 403 aa15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 OLFML2BQ68BL8 750 aa15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 MOXD1Q6UVY6 613 aa15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 MSL3Q8N5Y2 521 aaKnown RBP15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 TINF2Q9BSI4 451 aa15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 UBIAD1Q9Y5Z9 338 aa15.81■□□□□ 0.12
PHACTR4-203ENST00000463428 IGLV3-22A0A075B6J6 115 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 FAM86B1E9PN63 330 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 TDP2O95551 362 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 FAM86B2P0C5J1 330 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 MYCLP12524 364 aaPredicted RBP15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 ITGB5P18084 799 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 CCND2P30279 289 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 LBX1P52954 281 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 PRMT2P55345 433 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 NBR1Q14596 966 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 STXBP2Q15833 593 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 LETM2Q2VYF4 491 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 PPP4R3AQ6IN85 833 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 ARMCX2Q7L311 632 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 CYP2W1Q8TAV3 490 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 KATNBL1Q9H079 304 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 PCDHB6Q9Y5E3 794 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 SYNGAP1Q96PV0 1343 aa15.8■□□□□ 0.12
PHACTR4-203ENST00000463428 B4DLN1 442 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 MEIS1O00470 390 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 EIF3JO75822 258 aaKnown RBP15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 STAM2O75886 525 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 TTC38Q5R3I4 469 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 TRIB2Q92519 343 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 LENG9Q96B70 501 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 INPP4AQ96PE3 977 aaPredicted RBP15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 MXRA8Q9BRK3 442 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 RTEL1Q9NZ71 1219 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 NOL7Q9UMY1 257 aaKnown RBP15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 TRIM17Q9Y577 477 aa15.79■□□□□ 0.12
PHACTR4-203ENST00000463428 CCNT1O60563 726 aaKnown RBP15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 GCFC2P16383 781 aaKnown RBP15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 ATP2B1P20020 1258 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 PDE4DQ08499 809 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 ZNF174Q15697 407 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 Q4G0T1 1027 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 CEP55Q53EZ4 464 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 NIPA1Q7RTP0 329 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 C4orf32Q8N8J7 132 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 USP28Q96RU2 1077 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 MPHOSPH6Q99547 160 aaKnown RBP15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 NAP1L4Q99733 375 aaKnown RBP15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 JADE2Q9NQC1 790 aa15.78■□□□□ 0.12
PHACTR4-203ENST00000463428 SLC37A4O43826 429 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 ICAM3P32942 547 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 CYP2C19P33261 490 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 DNM1Q05193 864 aaKnown RBP15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 SEMA3FQ13275 785 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 ORC2Q13416 577 aaPredicted RBP15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 TRMT44Q8IYL2 757 aaKnown RBP15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 PXYLP1Q8TE99 480 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 WDR11Q9BZH6 1224 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 FTOQ9C0B1 505 aaKnown RBP eCLIP15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 CLIC4Q9Y696 253 aa15.77■□□□□ 0.12
PHACTR4-203ENST00000463428 RBM47A0AV96 593 aaKnown RBP15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 ADCY3O60266 1144 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 ARP10275 920 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 ZNF76P36508 570 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 PTPAQ15257 358 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 FOXD4L6Q3SYB3 417 aaPredicted RBP15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 PRR16Q569H4 304 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 ATL3Q6DD88 541 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 FOXD4L3Q6VB84 417 aaPredicted RBP15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 EEPD1Q7L9B9 569 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 PLA2G4DQ86XP0 818 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 TNPO1Q92973 898 aaKnown RBP15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 GPRASP2Q96D09 838 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 ABHD16BQ9H3Z7 469 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 VTA1Q9NP79 307 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 DDX25Q9UHL0 483 aaKnown RBP15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 PTCH2Q9Y6C5 1203 aa15.77■□□□□ 0.11
PHACTR4-203ENST00000463428 SPATA31C2B4DYI2 1134 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 ZNF865P0CJ78 1059 aaPredicted RBP15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 ELNP15502 786 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 MCM7P33993 719 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 TRIM32Q13049 653 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 ACVR2BQ13705 512 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 PRAMEF19Q5SWL8 479 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 ANO1Q5XXA6 986 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 FBXO16Q8IX29 292 aaPredicted RBP15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 RAET1EQ8TD07 263 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 HAS1Q92839 578 aa15.76■□□□□ 0.11
PHACTR4-203ENST00000463428 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms