RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
USH2A-203ENST00000463147 CD300LDQ6UXZ3 194 aa6.29□□□□□ -1.4
USH2A-203ENST00000463147 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
USH2A-203ENST00000463147 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
USH2A-203ENST00000463147 HAUS7Q99871 368 aa6.29□□□□□ -1.4
USH2A-203ENST00000463147 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.29□□□□□ -1.4
USH2A-203ENST00000463147 STXBP3O00186 592 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 CBFA2T2O43439 604 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 NTRK1P04629 796 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 GIMAP6Q6P9H5 292 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 DPH6Q7L8W6 267 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 CIR1Q86X95 450 aaPredicted RBP6.28□□□□□ -1.4
USH2A-203ENST00000463147 CPNE8Q86YQ8 564 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 ZFPM1Q8IX07 1006 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 Q8N1X5 172 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
USH2A-203ENST00000463147 ZNF747Q9BV97 191 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 TANGO6Q9C0B7 1094 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
USH2A-203ENST00000463147 FBLN5Q9UBX5 448 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 DDX41Q9UJV9 622 aaKnown RBP6.28□□□□□ -1.4
USH2A-203ENST00000463147 PCDHGB7Q9Y5F8 929 aa6.28□□□□□ -1.4
USH2A-203ENST00000463147 C7orf72A4D263 438 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 DDX3XO00571 662 aaKnown RBP eCLIP6.27□□□□□ -1.41
USH2A-203ENST00000463147 PPP1R11O60927 126 aaPredicted RBP6.27□□□□□ -1.41
USH2A-203ENST00000463147 FUCA1P04066 466 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
USH2A-203ENST00000463147 SLC6A11P48066 632 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 FBXW10Q5XX13 1052 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 ADAT2Q7Z6V5 191 aaKnown RBP6.27□□□□□ -1.41
USH2A-203ENST00000463147 SPATA32Q96LK8 384 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 GMLQ99445 158 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 MMP19Q99542 508 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 DNAJC2Q99543 621 aaKnown RBP6.27□□□□□ -1.41
USH2A-203ENST00000463147 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 CCSER2Q9H7U1 834 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 PPP4R1LQ9P1A2 415 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 TCAF1Q9Y4C2 921 aa6.27□□□□□ -1.41
USH2A-203ENST00000463147 ITGA1P56199 1179 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 COL9A2Q14055 689 aaPredicted RBP6.26□□□□□ -1.41
USH2A-203ENST00000463147 CDSNQ15517 529 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
USH2A-203ENST00000463147 DPY19L1Q2PZI1 675 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 GNPTABQ3T906 1256 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 PRAMEF18Q5VWM3 479 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 ARHGEF18Q6ZSZ5 1173 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 FAM126BQ8IXS8 530 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 ARHGEF39Q8N4T4 335 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 CRACR2BQ8N4Y2 399 aaPredicted RBP6.26□□□□□ -1.41
USH2A-203ENST00000463147 ADCY4Q8NFM4 1077 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 WRNIP1Q96S55 665 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 KLHL25Q9H0H3 589 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 PCED1AQ9H1Q7 454 aa6.26□□□□□ -1.41
USH2A-203ENST00000463147 B4GALT3O60512 393 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 VAMP4O75379 141 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 SELENOPP49908 381 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 EPHB4P54760 987 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 PPP2CBP62714 309 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 PPP2CAP67775 309 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 NKX3-2P78367 333 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 PURAQ00577 322 aaKnown RBP6.25□□□□□ -1.41
USH2A-203ENST00000463147 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 PLEKHO2Q8TD55 490 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 CRBNQ96SW2 442 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 TMEM168Q9H0V1 697 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 L2HGDHQ9H9P8 463 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 CD248Q9HCU0 757 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 CGGBP1Q9UFW8 167 aaPredicted RBP6.25□□□□□ -1.41
USH2A-203ENST00000463147 TESMINQ9Y4I5 508 aa6.25□□□□□ -1.41
USH2A-203ENST00000463147 ZNF28P17035 718 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 SLC7A5Q01650 507 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 KRTAP1-1Q07627 177 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 ICAM4Q14773 271 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 MROH9Q5TGP6 573 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 YIPF4Q9BSR8 244 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 JADE2Q9NQC1 790 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 SIT1Q9Y3P8 196 aa6.24□□□□□ -1.41
USH2A-203ENST00000463147 MUSKO15146 869 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 SGSM2O43147 1006 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 HSP90B1P14625 803 aaKnown RBP6.23□□□□□ -1.41
USH2A-203ENST00000463147 DNAJA1P31689 397 aaKnown RBP6.23□□□□□ -1.41
USH2A-203ENST00000463147 CRB2Q5IJ48 1285 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 IQCEQ6IPM2 695 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 POMZP3Q6PJE2 187 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 RIOX2Q8IUF8 465 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 C19orf47Q8N9M1 422 aaKnown RBP6.23□□□□□ -1.41
USH2A-203ENST00000463147 MARCH2Q9P0N8 246 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 SUGT1Q9Y2Z0 365 aa6.23□□□□□ -1.41
USH2A-203ENST00000463147 AMHP03971 560 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 GTF2F1P35269 517 aaKnown RBP eCLIP6.22□□□□□ -1.41
USH2A-203ENST00000463147 CHRNA2Q15822 529 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 HS1BP3Q53T59 392 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 PKN3Q6P5Z2 889 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 MILR1Q7Z6M3 343 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 ZNF654Q8IZM8 581 aa6.22□□□□□ -1.41
USH2A-203ENST00000463147 FAM26EQ8N5C1 309 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms