RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 EIF3JO75822 258 aaKnown RBP19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CDKL5O76039 1030 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CCND2P30279 289 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CLK2P49760 499 aaKnown RBP19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 FOSBP53539 338 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CCDC62Q6P9F0 684 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ANKLE1Q8NAG6 615 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ANO3Q9BYT9 981 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ZMYND12Q9H0C1 365 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 UPF3AQ9H1J1 476 aaKnown RBP19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 KCNJ14Q9UNX9 436 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 FRMPD3Q5JV73 1810 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 STK36Q9NRP7 1315 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 SPDYE3A6NKU9 549 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 C6orf222P0C671 652 aaPredicted RBP19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 TXNP10599 105 aaKnown RBP19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 COL6A1P12109 1028 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 GJA9P57773 515 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 NLRP5P59047 1200 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 LY6KQ17RY6 165 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 DUSP28Q4G0W2 176 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 TLK2Q86UE8 772 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ARRDC4Q8NCT1 418 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 KLHDC9Q8NEP7 349 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 SCFD2Q8WU76 684 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 FERMT2Q96AC1 680 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 BCAS3Q9H6U6 928 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 C6orf50Q9HD87 102 aa19.1■□□□□ 0.65
HLA-DPA1-245ENST00000463066 DNM1LO00429 736 aa19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 MLLT1Q03111 559 aaPredicted RBP19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 SEMA3FQ13275 785 aa19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 NPY5RQ15761 445 aa19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 NECAB2Q7Z6G3 386 aa19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ZSCAN31Q96LW9 406 aaPredicted RBP19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 C11orf49Q9H6J7 331 aa19.09■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ST18O60284 1047 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PCNX4Q63HM2 1172 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CCSAPQ6IQ19 270 aaPredicted RBP19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CCDC148Q8NFR7 591 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 OR6J1Q8NGC5 347 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CCDC12Q8WUD4 166 aaPredicted RBP19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ALG1Q9BT22 464 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SENP6Q9GZR1 1112 aaPredicted RBP19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 AP5M1Q9H0R1 490 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SH3GLB2Q9NR46 395 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 MRVI1Q9Y6F6 885 aa19.08■□□□□ 0.64
HLA-DPA1-245ENST00000463066 BRCA2P51587 3418 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 KBTBD13C9JR72 458 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ITGB5P18084 799 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ATN1P54259 1190 aaPredicted RBP19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SP2Q02086 613 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ARHGAP1Q07960 439 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 TTLL4Q14679 1199 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 KCNA10Q16322 511 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 GNASQ5JWF2 1037 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 RNF180Q86T96 592 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 REXO1Q8N1G1 1221 aaKnown RBP19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 TMX3Q96JJ7 454 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 INPP4AQ96PE3 977 aaPredicted RBP19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SH2B1Q9NRF2 756 aaPredicted RBP19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PCDH10Q9P2E7 1040 aa19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 DDX41Q9UJV9 622 aaKnown RBP19.07■□□□□ 0.64
HLA-DPA1-245ENST00000463066 FOSP01100 380 aaPredicted RBP19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ACLYP53396 1101 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 AP3B2Q13367 1082 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 FSCN1Q16658 493 aaKnown RBP19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CYP2W1Q8TAV3 490 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 OXER1Q8TDS5 423 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 GLT8D2Q9H1C3 349 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PCDHA4Q9UN74 947 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PHF24Q9UPV7 400 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 TELO2Q9Y4R8 837 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 UBIAD1Q9Y5Z9 338 aa19.06■□□□□ 0.64
HLA-DPA1-245ENST00000463066 EDIL3O43854 480 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CAPN2P17655 700 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 UBA1P22314 1058 aaKnown RBP19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CST5P28325 142 aaPredicted RBP19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 GNA11P29992 359 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SREBF1P36956 1147 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 NKX3-2P78367 333 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 LRRC26Q2I0M4 334 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 BLIDQ8IZY5 108 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PHF20Q9BVI0 1012 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SPC25Q9HBM1 224 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PKD2L1Q9P0L9 805 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 Q9Y3F1 56 aa19.05■□□□□ 0.64
HLA-DPA1-245ENST00000463066 A0A1W2PQ45 241 aaPredicted RBP19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 A0A1W2PQY0 241 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 SPATA31C2B4DYI2 1134 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 GH1P01241 217 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ASGR1P07306 291 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 GUCY1B3Q02153 619 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 XRRA1Q6P2D8 792 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CXCL17Q6UXB2 119 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 PPP1R13LQ8WUF5 828 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 AFG1LQ8WV93 481 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 CRYGNQ8WXF5 182 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
HLA-DPA1-245ENST00000463066 M0R2N6 131 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms