RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CKBP12277 381 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 SELPP16109 830 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
SND1-203ENST00000463020 CDC37Q16543 378 aaPredicted RBP18.4■□□□□ 0.54
SND1-203ENST00000463020 BRDTQ58F21 947 aaPredicted RBP18.4■□□□□ 0.54
SND1-203ENST00000463020 FAM117BQ6P1L5 589 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 SESTD1Q86VW0 696 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 SUGCTQ9HAC7 445 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 HDAC6Q9UBN7 1215 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 WDFY4Q6ZS81 3184 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 LINC01553A4QN01 128 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 SORBS3O60504 671 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 GH1P01241 217 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 KCNJ6P48051 423 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 PDE1AP54750 535 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 RBL2Q08999 1139 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 CAGE1Q8TC20 777 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 GTF2IRD1Q9UHL9 959 aa18.39■□□□□ 0.53
SND1-203ENST00000463020 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 OPLAHO14841 1288 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 CNKSR3Q6P9H4 555 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.38■□□□□ 0.53
SND1-203ENST00000463020 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 RGS22Q8NE09 1264 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 C5orf42Q9H799 3197 aa18.38■□□□□ 0.53
SND1-203ENST00000463020 RGS20O76081 388 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 GJB5O95377 273 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 EIF2AK2P19525 551 aaKnown RBP18.37■□□□□ 0.53
SND1-203ENST00000463020 PSEN2P49810 448 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
SND1-203ENST00000463020 QRICH1Q2TAL8 776 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 ZNF618Q5T7W0 954 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 C17orf80Q9BSJ5 609 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 DDX41Q9UJV9 622 aaKnown RBP18.37■□□□□ 0.53
SND1-203ENST00000463020 KIAA1217Q5T5P2 1943 aa18.37■□□□□ 0.53
SND1-203ENST00000463020 HAS3O00219 553 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 ERVK-21P61565 698 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 MFSD10Q14728 455 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 TMEM31Q5JXX7 168 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 CCDC171Q6TFL3 1326 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
SND1-203ENST00000463020 TTC14Q96N46 770 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 RMDN3Q96TC7 470 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 TRIOO75962 3097 aa18.36■□□□□ 0.53
SND1-203ENST00000463020 SIP14410 1827 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.35■□□□□ 0.53
SND1-203ENST00000463020 PPP1R11O60927 126 aaPredicted RBP18.35■□□□□ 0.53
SND1-203ENST00000463020 F2P00734 622 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 CCDC155Q8N6L0 562 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 PNMA1Q8ND90 353 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
SND1-203ENST00000463020 NSUN6Q8TEA1 469 aaKnown RBP18.35■□□□□ 0.53
SND1-203ENST00000463020 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
SND1-203ENST00000463020 MPHOSPH6Q99547 160 aaKnown RBP18.35■□□□□ 0.53
SND1-203ENST00000463020 RAD9AQ99638 391 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 BCAS3Q9H6U6 928 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 UBE2ZQ9H832 354 aaPredicted RBP18.35■□□□□ 0.53
SND1-203ENST00000463020 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
SND1-203ENST00000463020 ABCB11O95342 1321 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 KDM4AO75164 1064 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 IL9P15248 144 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
SND1-203ENST00000463020 STXBP2Q15833 593 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 DGKDQ16760 1214 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
SND1-203ENST00000463020 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 IL31RAQ8NI17 732 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 TGS1Q96RS0 853 aaKnown RBP18.34■□□□□ 0.53
SND1-203ENST00000463020 PXMP2Q9NR77 195 aa18.34■□□□□ 0.53
SND1-203ENST00000463020 LAMA4Q16363 1823 aa18.33■□□□□ 0.53
SND1-203ENST00000463020 PI4K2BG5E9Z4 385 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 GPR37L1O60883 481 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 SP2Q02086 613 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 PTK7Q13308 1070 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 SLC35G1Q2M3R5 365 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 STAG2Q8N3U4 1231 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
SND1-203ENST00000463020 EMID1Q96A84 441 aaPredicted RBP18.33■□□□□ 0.52
SND1-203ENST00000463020 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 PNMA2Q9UL42 364 aa18.33■□□□□ 0.52
SND1-203ENST00000463020 MUC6Q6W4X9 2439 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 ABHD14A-ACY1A0A1B0GW23 586 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 B4E1Z4 1266 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 LGR5O75473 907 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 NR3C2P08235 984 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 HOXD8P13378 290 aaPredicted RBP18.32■□□□□ 0.52
SND1-203ENST00000463020 KCNA5P22460 613 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
SND1-203ENST00000463020 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms