RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 HIC1Q14526 733 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 PTGISQ16647 500 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-204ENST00000462815 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-204ENST00000462815 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 MICALL1Q8N3F8 863 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 CAGE1Q8TC20 777 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 AFAP1L1Q8TED9 768 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 MTMR8Q96EF0 704 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 RNF41Q9H4P4 317 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-204ENST00000462815 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 GTF2IRD1Q9UHL9 959 aa13.07□□□□□ -0.32
PTPN7-204ENST00000462815 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
PTPN7-204ENST00000462815 GH1P01241 217 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 HSD17B4P51659 736 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 DEFB103AP81534 67 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 GRB10Q13322 594 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
PTPN7-204ENST00000462815 IWS1Q96ST2 819 aa13.06□□□□□ -0.32
PTPN7-204ENST00000462815 ZSCAN10Q96SZ4 725 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-204ENST00000462815 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
PTPN7-204ENST00000462815 TRIP12Q14669 1992 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-204ENST00000462815 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 B4DLN1 442 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 B4E1Z4 1266 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 ZNF213O14771 459 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 TLL1O43897 1013 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 CKBP12277 381 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 SELPP16109 830 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 MRPL12P52815 198 aaKnown RBP13.05□□□□□ -0.32
PTPN7-204ENST00000462815 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 LRRC8DQ7L1W4 858 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 STAG2Q8N3U4 1231 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN7-204ENST00000462815 PXMP2Q9NR77 195 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 HDAC6Q9UBN7 1215 aa13.05□□□□□ -0.32
PTPN7-204ENST00000462815 IGHDP01880 384 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
PTPN7-204ENST00000462815 HOXC8P31273 242 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 NUCB1Q02818 461 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 SEC23AQ15436 765 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 STXBP2Q15833 593 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-204ENST00000462815 KAT14Q9H8E8 782 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 SIP14410 1827 aa13.04□□□□□ -0.32
PTPN7-204ENST00000462815 MYH6P13533 1939 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 EIF3JO75822 258 aaKnown RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 GJB5O95377 273 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 NR3C2P08235 984 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 CASTP20810 708 aaKnown RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 PSEN2P49810 448 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 ZNF200P98182 395 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 SP2Q02086 613 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 PTK7Q13308 1070 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 DGKDQ16760 1214 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 STOX1Q6ZVD7 989 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 CHST3Q7LGC8 479 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 MCF2L2Q86YR7 1114 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 CCDC155Q8N6L0 562 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 IL31RAQ8NI17 732 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 COG5Q9UP83 839 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 NOD1Q9Y239 953 aa13.03□□□□□ -0.32
PTPN7-204ENST00000462815 MRPL11Q9Y3B7 192 aaKnown RBP13.03□□□□□ -0.32
PTPN7-204ENST00000462815 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-204ENST00000462815 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
PTPN7-204ENST00000462815 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
PTPN7-204ENST00000462815 ERVK-21P61565 698 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 MFSD10Q14728 455 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
PTPN7-204ENST00000462815 KIAA0753Q2KHM9 967 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 AAK1Q2M2I8 961 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 HSDL1Q3SXM5 330 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 ZNF618Q5T7W0 954 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 ARHGEF16Q5VV41 709 aa13.02□□□□□ -0.33
PTPN7-204ENST00000462815 MYSM1Q5VVJ2 828 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms