RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 BTDP43251 543 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 GABPAQ06546 454 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 RASA3Q14644 834 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 TSHZ3Q63HK5 1081 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 NAA16Q6N069 864 aaPredicted RBP6.93□□□□□ -1.3
VPS36-202ENST00000462289 DLK2Q6UY11 383 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 USP48Q86UV5 1035 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 DZIP1Q86YF9 867 aaKnown RBP6.93□□□□□ -1.3
VPS36-202ENST00000462289 AGGF1Q8N302 714 aaeCLIP6.93□□□□□ -1.3
VPS36-202ENST00000462289 JMYQ8N9B5 988 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 PBX4Q9BYU1 374 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 ADAM19Q9H013 955 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 ELP3Q9H9T3 547 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 TMEM63CQ9P1W3 806 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 LRP2BPQ9P2M1 347 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 ROBO3Q96MS0 1386 aa6.93□□□□□ -1.3
VPS36-202ENST00000462289 PARP14Q460N5 1801 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 CLRN2A0PK11 232 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 FAM155AB1AL88 458 aaPredicted RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 WISP1O95388 367 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 RPLP1P05386 114 aaKnown RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 NBPF12Q5TAG4 269 aaPredicted RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 SLC9C2Q5TAH2 1124 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 GIMAP6Q6P9H5 292 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 ZFPM1Q8IX07 1006 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 MAGEB6Q8N7X4 407 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS36-202ENST00000462289 HELQQ8TDG4 1101 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 APPBP2Q92624 585 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 OSBP2Q969R2 916 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 EVI5LQ96CN4 794 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 CCDC97Q96F63 343 aaPredicted RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 TMEM39BQ9GZU3 492 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 LACRTQ9GZZ8 138 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 PUS7LQ9H0K6 701 aaKnown RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 OSBPL5Q9H0X9 879 aaPredicted RBP6.92□□□□□ -1.3
VPS36-202ENST00000462289 EHD4Q9H223 541 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 RAI14Q9P0K7 980 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 SEPT3Q9UH03 358 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 ZMYM6O95789 1325 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 FLT1P17948 1338 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 ZNF532Q9HCE3 1301 aa6.92□□□□□ -1.3
VPS36-202ENST00000462289 RLFQ13129 1914 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 DDTLA6NHG4 134 aaPredicted RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 FSCN2O14926 492 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 RNF113AO15541 343 aaKnown RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 IDH1O75874 414 aaKnown RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 GLB1P16278 677 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 EPHA1P21709 976 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 CYP7A1P22680 504 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 RGS3P49796 1198 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 CACNB3P54284 484 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 UVSSAQ2YD98 709 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 NOL9Q5SY16 702 aaKnown RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 TTC22Q5TAA0 569 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 ATCAYQ86WG3 371 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 SH3RF3Q8TEJ3 882 aaPredicted RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 STRBPQ96SI9 672 aaKnown RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 DNAJC2Q99543 621 aaKnown RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 POP1Q99575 1024 aaKnown RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 DNAJC18Q9H819 358 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 GBA2Q9HCG7 927 aaPredicted RBP6.91□□□□□ -1.3
VPS36-202ENST00000462289 USP40Q9NVE5 1235 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 KCNK4Q9NYG8 393 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 SALL4Q9UJQ4 1053 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
VPS36-202ENST00000462289 GSG1L2A8MUP6 293 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 GSC2O15499 205 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 CELF2O95319 508 aaKnown RBP6.9□□□□□ -1.3
VPS36-202ENST00000462289 BAG3O95817 575 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 FGRP09769 529 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 TNNI2P48788 182 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 DYNLL1P63167 89 aaKnown RBP6.9□□□□□ -1.3
VPS36-202ENST00000462289 ALX1Q15699 326 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 SUPT20HL1Q3ZLR7 823 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 SBK1Q52WX2 424 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 BMP2KLQ5H9B9 411 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 ZSCAN25Q6NSZ9 544 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 TATDN1Q6P1N9 297 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 ARMC10Q8N2F6 343 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 LCORLQ8N3X6 602 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 WNT8BQ93098 351 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS36-202ENST00000462289 DHX36Q9H2U1 1008 aaKnown RBP6.9□□□□□ -1.3
VPS36-202ENST00000462289 EPB41L4AQ9HCS5 686 aaPredicted RBP6.9□□□□□ -1.3
VPS36-202ENST00000462289 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
VPS36-202ENST00000462289 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 PPP4R2Q9NY27 417 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 AATFQ9NY61 560 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS36-202ENST00000462289 CNTN3Q9P232 1028 aa6.9□□□□□ -1.3
VPS36-202ENST00000462289 TCP10L2B9ZVM9 353 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms