RNA–Protein interactions for RNA: ENST00000462263.1

TWISTNB-202, Transcript of TWIST neighbor, humanhuman

TSL 2

Gene TWISTNB, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNB-202ENST00000462263 TSPAN17Q96FV3 270 aa5.42□□□□□ -1.54
TWISTNB-202ENST00000462263 MMP19Q99542 508 aa5.42□□□□□ -1.54
TWISTNB-202ENST00000462263 ACTR10Q9NZ32 417 aa5.42□□□□□ -1.54
TWISTNB-202ENST00000462263 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.42□□□□□ -1.54
TWISTNB-202ENST00000462263 GRIN2BQ13224 1484 aa5.42□□□□□ -1.54
TWISTNB-202ENST00000462263 HECW1Q76N89 1606 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 ERCC6Q03468 1493 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 SUPT6HQ7KZ85 1726 aaKnown RBP5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 A0A1B0GTL3 188 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 ASGR2P07307 311 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 TCF3P15923 654 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 IQCEQ6IPM2 695 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 PRRT2Q7Z6L0 340 aaPredicted RBP5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 COPS5Q92905 334 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 TEPSINQ96N21 525 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 CYP26B1Q9NR63 512 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 GULP1Q9UBP9 304 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 APEX2Q9UBZ4 518 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 MAPKBP1O60336 1514 aa5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 CDK13Q14004 1512 aaKnown RBP5.41□□□□□ -1.54
TWISTNB-202ENST00000462263 IFT140Q96RY7 1462 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 EHBP1L1Q8N3D4 1523 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 PPP1R11O60927 126 aaPredicted RBP5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 SCRN1Q12765 414 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 FAM50AQ14320 339 aaKnown RBP5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 VWA3BQ502W6 1294 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 FRMD5Q7Z6J6 570 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 TRIM59Q8IWR1 403 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 ZNF526Q8TF50 670 aaPredicted RBP5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 PPP1R14AQ96A00 147 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 SPATA25Q9BR10 227 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 FBLN5Q9UBX5 448 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
TWISTNB-202ENST00000462263 KIAA0556O60303 1618 aa5.4□□□□□ -1.55
TWISTNB-202ENST00000462263 RAB3GAP2Q9H2M9 1393 aa5.4□□□□□ -1.55
TWISTNB-202ENST00000462263 FMN1Q68DA7 1419 aa5.4□□□□□ -1.55
TWISTNB-202ENST00000462263 CEP170Q5SW79 1584 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 C7orf72A4D263 438 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 SMAD7O15105 426 aaKnown RBP5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 PMLP29590 882 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 FXNQ16595 210 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 GTF2IRD2BQ6EKJ0 949 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 LIPIQ6XZB0 460 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 B3GNT8Q7Z7M8 397 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 GTF2IRD2Q86UP8 949 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 FAM178BQ8IXR5 827 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 MTA3Q9BTC8 594 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 NKX2-4Q9H2Z4 354 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 CLEC1BQ9P126 229 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 MRVI1Q9Y6F6 885 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 NCOA2Q15596 1464 aa5.39□□□□□ -1.55
TWISTNB-202ENST00000462263 PTPN23Q9H3S7 1636 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 FUCA1P04066 466 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 PLS3P13797 630 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 HOXC12P31275 282 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 GTF2A2P52657 109 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 HTRA3P83110 453 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 PLP2Q04941 152 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 RTP5Q14D33 572 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 NT5DC1Q5TFE4 455 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 LARP1BQ659C4 914 aaKnown RBP5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 E4F1Q66K89 784 aaPredicted RBP5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 C6orf15Q6UXA7 325 aaPredicted RBP5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 SMARCC2Q8TAQ2 1214 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 CPA5Q8WXQ8 436 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 MRGPRX3Q96LB0 322 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 CCDC140Q96MF4 163 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 BDH2Q9BUT1 245 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 PCDH18Q9HCL0 1135 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 LRP2BPQ9P2M1 347 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 FGD6Q6ZV73 1430 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 GRIN2AQ12879 1464 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 UGGT2Q9NYU1 1516 aa5.38□□□□□ -1.55
TWISTNB-202ENST00000462263 PRICKLE3O43900 615 aaPredicted RBP5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 DDAH1O94760 285 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 CPP00450 1065 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 THBDP07204 575 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 ARID5AQ03989 594 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 SV2CQ496J9 727 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 UBXN11Q5T124 520 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 NOX5Q96PH1 765 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 AP5M1Q9H0R1 490 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 EPN3Q9H201 632 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 GPRC5CQ9NQ84 441 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 SIT1Q9Y3P8 196 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 R3HCC1Q9Y3T6 440 aaKnown RBP5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 MTUS2Q5JR59 1369 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 RAPGEF6Q8TEU7 1601 aa5.37□□□□□ -1.55
TWISTNB-202ENST00000462263 SH3D21A4FU49 640 aa5.36□□□□□ -1.55
TWISTNB-202ENST00000462263 AGRPO00253 132 aa5.36□□□□□ -1.55
TWISTNB-202ENST00000462263 NTRK1P04629 796 aa5.36□□□□□ -1.55
TWISTNB-202ENST00000462263 CACNB2Q08289 660 aaPredicted RBP5.36□□□□□ -1.55
TWISTNB-202ENST00000462263 KCNAB2Q13303 367 aa5.36□□□□□ -1.55
TWISTNB-202ENST00000462263 DBX2Q6ZNG2 339 aa5.36□□□□□ -1.55
TWISTNB-202ENST00000462263 FERMT3Q86UX7 667 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms