RNA–Protein interactions for RNA: ENST00000462263.1

TWISTNB-202, Transcript of TWIST neighbor, humanhuman

TSL 2

Gene TWISTNB, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNB-202ENST00000462263 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
TWISTNB-202ENST00000462263 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
TWISTNB-202ENST00000462263 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
TWISTNB-202ENST00000462263 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
TWISTNB-202ENST00000462263 FOXD1Q16676 465 aa17.56■□□□□ 0.4
TWISTNB-202ENST00000462263 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
TWISTNB-202ENST00000462263 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
TWISTNB-202ENST00000462263 ADRA2BP18089 450 aa16.56■□□□□ 0.24
TWISTNB-202ENST00000462263 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
TWISTNB-202ENST00000462263 MSH5O43196 834 aa16.35■□□□□ 0.21
TWISTNB-202ENST00000462263 POTEDQ86YR6 584 aa15.64■□□□□ 0.09
TWISTNB-202ENST00000462263 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
TWISTNB-202ENST00000462263 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
TWISTNB-202ENST00000462263 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
TWISTNB-202ENST00000462263 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
TWISTNB-202ENST00000462263 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
TWISTNB-202ENST00000462263 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
TWISTNB-202ENST00000462263 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
TWISTNB-202ENST00000462263 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
TWISTNB-202ENST00000462263 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
TWISTNB-202ENST00000462263 NPM3O75607 178 aaKnown RBP14.25□□□□□ -0.13
TWISTNB-202ENST00000462263 KCNA4P22459 653 aa14.17□□□□□ -0.14
TWISTNB-202ENST00000462263 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
TWISTNB-202ENST00000462263 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
TWISTNB-202ENST00000462263 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
TWISTNB-202ENST00000462263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.19
TWISTNB-202ENST00000462263 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
TWISTNB-202ENST00000462263 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
TWISTNB-202ENST00000462263 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
TWISTNB-202ENST00000462263 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
TWISTNB-202ENST00000462263 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
TWISTNB-202ENST00000462263 CAPN15O75808 1086 aa13.32□□□□□ -0.28
TWISTNB-202ENST00000462263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
TWISTNB-202ENST00000462263 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
TWISTNB-202ENST00000462263 APLP2Q06481 763 aa13.22□□□□□ -0.29
TWISTNB-202ENST00000462263 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
TWISTNB-202ENST00000462263 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
TWISTNB-202ENST00000462263 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
TWISTNB-202ENST00000462263 DSG3P32926 999 aa13.16□□□□□ -0.3
TWISTNB-202ENST00000462263 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
TWISTNB-202ENST00000462263 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
TWISTNB-202ENST00000462263 ABCB7O75027 752 aa13.03□□□□□ -0.32
TWISTNB-202ENST00000462263 ZBTB22O15209 634 aa13□□□□□ -0.33
TWISTNB-202ENST00000462263 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
TWISTNB-202ENST00000462263 POLA2Q14181 598 aa12.83□□□□□ -0.36
TWISTNB-202ENST00000462263 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
TWISTNB-202ENST00000462263 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
TWISTNB-202ENST00000462263 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
TWISTNB-202ENST00000462263 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
TWISTNB-202ENST00000462263 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
TWISTNB-202ENST00000462263 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
TWISTNB-202ENST00000462263 FBLN2P98095 1184 aa12.37□□□□□ -0.43
TWISTNB-202ENST00000462263 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
TWISTNB-202ENST00000462263 POTEHQ6S545 545 aa12.3□□□□□ -0.44
TWISTNB-202ENST00000462263 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
TWISTNB-202ENST00000462263 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
TWISTNB-202ENST00000462263 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
TWISTNB-202ENST00000462263 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
TWISTNB-202ENST00000462263 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
TWISTNB-202ENST00000462263 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
TWISTNB-202ENST00000462263 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
TWISTNB-202ENST00000462263 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
TWISTNB-202ENST00000462263 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
TWISTNB-202ENST00000462263 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
TWISTNB-202ENST00000462263 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
TWISTNB-202ENST00000462263 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
TWISTNB-202ENST00000462263 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
TWISTNB-202ENST00000462263 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
TWISTNB-202ENST00000462263 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
TWISTNB-202ENST00000462263 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
TWISTNB-202ENST00000462263 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
TWISTNB-202ENST00000462263 HAX1O00165 279 aa11.73□□□□□ -0.53
TWISTNB-202ENST00000462263 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
TWISTNB-202ENST00000462263 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
TWISTNB-202ENST00000462263 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
TWISTNB-202ENST00000462263 EVX2Q03828 476 aa11.57□□□□□ -0.56
TWISTNB-202ENST00000462263 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
TWISTNB-202ENST00000462263 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
TWISTNB-202ENST00000462263 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
TWISTNB-202ENST00000462263 PROM2Q8N271 834 aa11.49□□□□□ -0.57
TWISTNB-202ENST00000462263 FKBP8Q14318 412 aa11.45□□□□□ -0.58
TWISTNB-202ENST00000462263 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
TWISTNB-202ENST00000462263 GABBR2O75899 941 aa11.32□□□□□ -0.6
TWISTNB-202ENST00000462263 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
TWISTNB-202ENST00000462263 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
TWISTNB-202ENST00000462263 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
TWISTNB-202ENST00000462263 MIER1Q8N108 512 aa11.28□□□□□ -0.6
TWISTNB-202ENST00000462263 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
TWISTNB-202ENST00000462263 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
TWISTNB-202ENST00000462263 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
TWISTNB-202ENST00000462263 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
TWISTNB-202ENST00000462263 CLCN6P51797 869 aa11.18□□□□□ -0.62
TWISTNB-202ENST00000462263 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
TWISTNB-202ENST00000462263 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
TWISTNB-202ENST00000462263 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
TWISTNB-202ENST00000462263 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
TWISTNB-202ENST00000462263 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
TWISTNB-202ENST00000462263 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
TWISTNB-202ENST00000462263 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
TWISTNB-202ENST00000462263 RASEFQ8IZ41 740 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms