RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 IGSF3O75054 1194 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 PLS3P13797 630 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 RPL13P26373 211 aaKnown RBP5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 FAM26FQ5R3K3 315 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 PRAMEF18Q5VWM3 479 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 MCTP2Q6DN12 878 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 IQCEQ6IPM2 695 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 BVESQ8NE79 360 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 SAMD11Q96NU1 681 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 MMP19Q99542 508 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 GORASP1Q9BQQ3 440 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 GPRC5CQ9NQ84 441 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 USP35Q9P2H5 1018 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
SPTLC1-203ENST00000461132 C22orf46C9J442 243 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 PPP1R11O60927 126 aaPredicted RBP5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 CYP1A1P04798 512 aaPredicted RBP5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 THBDP07204 575 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 C8BP07358 591 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 THBS2P35442 1172 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 RPL11P62913 178 aaKnown RBP5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 SURF1Q15526 300 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 MILR1Q7Z6M3 343 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 PLEKHH3Q7Z736 793 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 TEX2Q8IWB9 1127 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 TTC9BQ8N6N2 239 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 KLHL6Q8WZ60 621 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 ANAPC16Q96DE5 110 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 COA3Q9Y2R0 106 aaPredicted RBP5.52□□□□□ -1.53
SPTLC1-203ENST00000461132 ATF4P18848 351 aaPredicted RBP5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 GTF2A2P52657 109 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 ZNF143P52747 638 aaPredicted RBP5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 NKX3-2P78367 333 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 ZXDAP98168 799 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 CHRNA2Q15822 529 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 MROH9Q5TGP6 573 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 TRMT2BQ96GJ1 504 aaKnown RBP5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 LCORQ96JN0 433 aaPredicted RBP5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 LRP2BPQ9P2M1 347 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 STRIP2Q9ULQ0 834 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 INVSQ9Y283 1065 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 EMC9Q9Y3B6 208 aa5.51□□□□□ -1.53
SPTLC1-203ENST00000461132 LOC105371045A0A1W2PR82 267 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 CYP7B1O75881 506 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 ARID5AQ03989 594 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 NCAPHQ15003 741 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 TBC1D10BQ4KMP7 808 aaPredicted RBP5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 STK32CQ86UX6 486 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 PLEKHO2Q8TD55 490 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 COPS5Q92905 334 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 KISS1RQ969F8 398 aaPredicted RBP5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 CHAMP1Q96JM3 812 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.5□□□□□ -1.531e-6■□□□□ 8.5
SPTLC1-203ENST00000461132 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 APEX2Q9UBZ4 518 aa5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 TIMM13Q9Y5L4 95 aaPredicted RBP5.5□□□□□ -1.53
SPTLC1-203ENST00000461132 DDX3XO00571 662 aaKnown RBP eCLIP5.49□□□□□ -1.533e-7■■■■□ 23.1
SPTLC1-203ENST00000461132 SGSM2O43147 1006 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 DNAJA1P31689 397 aaKnown RBP5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 SLC6A11P48066 632 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 CASP7P55210 303 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 GTF2IRD2BQ6EKJ0 949 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 CEP68Q76N32 757 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 GTF2IRD2Q86UP8 949 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 MIB1Q86YT6 1006 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 FAM126BQ8IXS8 530 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 FAM26EQ8N5C1 309 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 TXNDC5Q8NBS9 432 aaKnown RBP5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 TMEM169Q96HH4 297 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 JADE2Q9NQC1 790 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 CYP26B1Q9NR63 512 aa5.49□□□□□ -1.53
SPTLC1-203ENST00000461132 FSHBP01225 129 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 HSP90B1P14625 803 aaKnown RBP5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 ZNF20P17024 532 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 TNFRSF1AP19438 455 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 ITGA1P56199 1179 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 E4F1Q66K89 784 aaPredicted RBP5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 RIOX2Q8IUF8 465 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 DIO2Q92813 273 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 DVL3Q92997 716 aaPredicted RBP5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 SHDQ96IW2 340 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 CLIC6Q96NY7 704 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 RBM15Q96T37 977 aaKnown RBP eCLIP5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 NKX2-4Q9H2Z4 354 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 MRVI1Q9Y6F6 885 aa5.48□□□□□ -1.53
SPTLC1-203ENST00000461132 NPEPPSL1A6NEC2 478 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 C9orf118A6NHY6 69 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 MEFVO15553 781 aaPredicted RBP5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 SNRPB2P08579 225 aaKnown RBP5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 FPR2P25090 351 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 STAT5AP42229 794 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 KCNAB2Q13303 367 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 SV2CQ496J9 727 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 TRIM59Q8IWR1 403 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 DPF3Q92784 378 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 WRNIP1Q96S55 665 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms