RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SLC30A10Q6XR72 485 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 MORC4Q8TE76 937 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 RANBP17Q9H2T7 1088 aaKnown RBP17.1■□□□□ 0.33
NCK1-202ENST00000460960 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 PRC1O43663 620 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
NCK1-202ENST00000460960 RFC2P35250 354 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 KCNJ6P48051 423 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 TAP1Q03518 808 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 IGDCC4Q8TDY8 1250 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 ANKS1AQ92625 1134 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 COPS5Q92905 334 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
NCK1-202ENST00000460960 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
NCK1-202ENST00000460960 EPHX3Q9H6B9 360 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 COG5Q9UP83 839 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 HCN4Q9Y3Q4 1203 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
NCK1-202ENST00000460960 REV3LO60673 3130 aa17.08■□□□□ 0.33
NCK1-202ENST00000460960 SCN10AQ9Y5Y9 1956 aa17.08■□□□□ 0.33
NCK1-202ENST00000460960 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
NCK1-202ENST00000460960 TLL1O43897 1013 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 ARHGEF15O94989 841 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 IQCF3P0C7M6 154 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 BFSP2Q13515 415 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 HLA-CQ95604 372 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 NEK1Q96PY6 1258 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.32
NCK1-202ENST00000460960 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.32
NCK1-202ENST00000460960 EXOSC10Q01780 885 aaKnown RBP17.07■□□□□ 0.32
NCK1-202ENST00000460960 NFRKBQ6P4R8 1299 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 TET1Q8NFU7 2136 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 PHOSPHO2Q8TCD6 241 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 SCFD2Q8WU76 684 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 TTC14Q96N46 770 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
NCK1-202ENST00000460960 PITPNM1O00562 1244 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 SH2B2O14492 632 aaPredicted RBP17.06■□□□□ 0.32
NCK1-202ENST00000460960 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
NCK1-202ENST00000460960 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
NCK1-202ENST00000460960 KPNA6O60684 536 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
NCK1-202ENST00000460960 PDHBP11177 359 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 POU3F3P20264 500 aaPredicted RBP17.06■□□□□ 0.32
NCK1-202ENST00000460960 MCM5P33992 734 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 GRB10Q13322 594 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 SPRED2Q7Z698 418 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 LRFN3Q9BTN0 628 aa17.06■□□□□ 0.32
NCK1-202ENST00000460960 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
NCK1-202ENST00000460960 LOC102724159A0A0B4J2E5 919 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 RBM47A0AV96 593 aaKnown RBP17.05■□□□□ 0.32
NCK1-202ENST00000460960 NT5C2P49902 561 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
NCK1-202ENST00000460960 PWP2Q15269 919 aaKnown RBP17.05■□□□□ 0.32
NCK1-202ENST00000460960 PTGISQ16647 500 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 TMEM31Q5JXX7 168 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 IFIT1BQ5T764 474 aaKnown RBP17.05■□□□□ 0.32
NCK1-202ENST00000460960 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
NCK1-202ENST00000460960 RAB11FIP4Q86YS3 637 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 GDPD5Q8WTR4 605 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
NCK1-202ENST00000460960 FAM86C2PA6NEL3 165 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 B4DLN1 442 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 BAIAP3O94812 1187 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 SNHG28P0DPA3 235 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
NCK1-202ENST00000460960 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
NCK1-202ENST00000460960 PTPN11Q06124 597 aaPredicted RBP17.04■□□□□ 0.32
NCK1-202ENST00000460960 KRT32Q14532 448 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 WTAPQ15007 396 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 USH1GQ495M9 461 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 BTNL9Q6UXG8 535 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
NCK1-202ENST00000460960 CLEC4DQ8WXI8 215 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
NCK1-202ENST00000460960 KAT14Q9H8E8 782 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 XIRP2A4UGR9 3374 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 PTPRSQ13332 1948 aa17.04■□□□□ 0.32
NCK1-202ENST00000460960 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
NCK1-202ENST00000460960 A6NJR5 290 aa17.03■□□□□ 0.32
NCK1-202ENST00000460960 RPS6KB1P23443 525 aa17.03■□□□□ 0.32
NCK1-202ENST00000460960 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
NCK1-202ENST00000460960 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
NCK1-202ENST00000460960 TRANK1O15050 2925 aa17.03■□□□□ 0.32
NCK1-202ENST00000460960 ARIH2O95376 493 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 RXRAP19793 462 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.32
NCK1-202ENST00000460960 SLC35G1Q2M3R5 365 aa17.02■□□□□ 0.32
NCK1-202ENST00000460960 FAM117BQ6P1L5 589 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms