RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 XBP1P17861 261 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 MCM4P33991 863 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 PGM5Q15124 567 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 GALNT17Q6IS24 598 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 TAPT1Q6NXT6 567 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 REXO1Q8N1G1 1221 aaKnown RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 DUSP11O75319 330 aaKnown RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 CLK2P49760 499 aaKnown RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 UBE2SQ16763 222 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 VSIG10LQ86VR7 867 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
APTX-209ENST00000460940 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
APTX-209ENST00000460940 FRMPD3Q5JV73 1810 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 CAPN15O75808 1086 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 BRD2P25440 801 aaKnown RBP12.67□□□□□ -0.38
APTX-209ENST00000460940 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 PCNX4Q63HM2 1172 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 EEPD1Q7L9B9 569 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 ARRDC4Q8NCT1 418 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 Q9Y3F1 56 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
APTX-209ENST00000460940 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
APTX-209ENST00000460940 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
APTX-209ENST00000460940 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 NLRP5P59047 1200 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
APTX-209ENST00000460940 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 GNPTABQ3T906 1256 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 KCNV1Q6PIU1 500 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
APTX-209ENST00000460940 IL31RAQ8NI17 732 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 WDR11Q9BZH6 1224 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 UPF3AQ9H1J1 476 aaKnown RBP12.66□□□□□ -0.38
APTX-209ENST00000460940 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
APTX-209ENST00000460940 SYNRGQ9UMZ2 1314 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 DNM1LO00429 736 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 MYCLP12524 364 aaPredicted RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 RGS19P49795 217 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 NKX3-2P78367 333 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 RNF180Q86T96 592 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 TMX3Q96JJ7 454 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 ANO3Q9BYT9 981 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 PDGFCQ9NRA1 345 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 GNEQ9Y223 722 aaKnown RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 ADCY6O43306 1168 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 JAK2O60674 1132 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 SMPD1P17405 629 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 CST5P28325 142 aaPredicted RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 SREBF1P36956 1147 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 GJA9P57773 515 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 TLK2Q86UE8 772 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 LENG1Q96BZ8 264 aaPredicted RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
APTX-209ENST00000460940 INPP4AQ96PE3 977 aaPredicted RBP12.65□□□□□ -0.38
APTX-209ENST00000460940 BRCA2P51587 3418 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 KBTBD13C9JR72 458 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 ADAMTS4O75173 837 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 TGFB3P10600 412 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 LRRC41Q15345 812 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 SEPT14Q6ZU15 432 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
APTX-209ENST00000460940 CDHR1Q96JP9 859 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 AP5M1Q9H0R1 490 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 KIF3AQ9Y496 699 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
APTX-209ENST00000460940 FIBPO43427 364 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 RGS20O76081 388 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 TXNP10599 105 aaKnown RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 ICAM3P32942 547 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
APTX-209ENST00000460940 TRIM29Q14134 588 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 NECAB2Q7Z6G3 386 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
APTX-209ENST00000460940 BLIDQ8IZY5 108 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms