RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 PHF20Q9BVI0 1012 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 PCDHA4Q9UN74 947 aa25.71■■□□□ 1.71
C9orf3-209ENST00000460573 SEPT4O43236 478 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 EIF3JO75822 258 aaKnown RBP25.7■■□□□ 1.7
C9orf3-209ENST00000460573 STAM2O75886 525 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 CCND2P30279 289 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 TRIM29Q14134 588 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 VSIG10LQ86VR7 867 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 HSCBQ8IWL3 235 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 KATNBL1Q9H079 304 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 ZHX1Q9UKY1 873 aaPredicted RBP25.7■■□□□ 1.7
C9orf3-209ENST00000460573 FAM184BQ9ULE4 1060 aa25.7■■□□□ 1.7
C9orf3-209ENST00000460573 AKR1A1P14550 325 aa25.69■■□□□ 1.7
C9orf3-209ENST00000460573 BLIDQ8IZY5 108 aa25.69■■□□□ 1.7
C9orf3-209ENST00000460573 FRMPD3Q5JV73 1810 aa25.68■■□□□ 1.7
C9orf3-209ENST00000460573 DTNBO60941 627 aa25.68■■□□□ 1.7
C9orf3-209ENST00000460573 PCNX4Q63HM2 1172 aa25.68■■□□□ 1.7
C9orf3-209ENST00000460573 ANO3Q9BYT9 981 aa25.68■■□□□ 1.7
C9orf3-209ENST00000460573 BRMS1Q9HCU9 246 aa25.68■■□□□ 1.7
C9orf3-209ENST00000460573 DDX20Q9UHI6 824 aaKnown RBP25.68■■□□□ 1.7
C9orf3-209ENST00000460573 ALPK3Q96L96 1907 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 MYCNP04198 464 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-209ENST00000460573 MYCLP12524 364 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-209ENST00000460573 JAKMIP3Q5VZ66 844 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 IQSEC1Q6DN90 963 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 TAPT1Q6NXT6 567 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 EEPD1Q7L9B9 569 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 FBXO16Q8IX29 292 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-209ENST00000460573 INTS4Q96HW7 963 aaKnown RBP25.67■■□□□ 1.7
C9orf3-209ENST00000460573 C8orf76Q96K31 380 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 TMEM260Q9NX78 707 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 KCNJ14Q9UNX9 436 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 SMC3Q9UQE7 1217 aa25.67■■□□□ 1.7
C9orf3-209ENST00000460573 RBM47A0AV96 593 aaKnown RBP25.66■■□□□ 1.7
C9orf3-209ENST00000460573 NPY5RQ15761 445 aa25.66■■□□□ 1.7
C9orf3-209ENST00000460573 CCDC144BQ3MJ40 725 aa25.66■■□□□ 1.7
C9orf3-209ENST00000460573 DDX49Q9Y6V7 483 aaKnown RBP25.66■■□□□ 1.7
C9orf3-209ENST00000460573 MCM3APO60318 1980 aa25.65■■□□□ 1.7
C9orf3-209ENST00000460573 M0R2N6 131 aa25.65■■□□□ 1.7
C9orf3-209ENST00000460573 KRT40Q6A162 431 aa25.65■■□□□ 1.7
C9orf3-209ENST00000460573 IL31RAQ8NI17 732 aa25.65■■□□□ 1.7
C9orf3-209ENST00000460573 SCFD2Q8WU76 684 aa25.65■■□□□ 1.7
C9orf3-209ENST00000460573 ZMYND8Q9ULU4 1186 aaPredicted RBP25.65■■□□□ 1.7
C9orf3-209ENST00000460573 LRRC37A2A6NM11 1700 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 MMP1P03956 469 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 RARBP10826 455 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 GJB2P29033 226 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 SREBF1P36956 1147 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 GNPTABQ3T906 1256 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 LHX8Q68G74 356 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 KCNV1Q6PIU1 500 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 GJB4Q9NTQ9 266 aa25.64■■□□□ 1.7
C9orf3-209ENST00000460573 KRT2P35908 639 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 MRPS9P82933 396 aaKnown RBP25.63■■□□□ 1.69
C9orf3-209ENST00000460573 TNFAIP2Q03169 654 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 TTLL4Q14679 1199 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 SAFBQ15424 915 aaKnown RBP eCLIP25.63■■□□□ 1.69
C9orf3-209ENST00000460573 KRT25Q7Z3Z0 450 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 FBXO18Q8NFZ0 1043 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 WDR11Q9BZH6 1224 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 PDGFCQ9NRA1 345 aa25.63■■□□□ 1.69
C9orf3-209ENST00000460573 ADAMTS3O15072 1205 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 NKRFO15226 690 aaKnown RBP eCLIP25.62■■□□□ 1.699e-10■■■■■ 29
C9orf3-209ENST00000460573 DUSP11O75319 330 aaKnown RBP25.62■■□□□ 1.69
C9orf3-209ENST00000460573 CYP3A4P08684 503 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 TGFB3P10600 412 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 ADCYAP1R1P41586 468 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 FXR1P51114 621 aaKnown RBP eCLIP25.62■■□□□ 1.69
C9orf3-209ENST00000460573 ARHGAP4P98171 946 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 SEPT14Q6ZU15 432 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 NLRX1Q86UT6 975 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 RASGRP4Q8TDF6 673 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 PGBD1Q96JS3 809 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 INPP4AQ96PE3 977 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-209ENST00000460573 SENP6Q9GZR1 1112 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-209ENST00000460573 Q9Y3F1 56 aa25.62■■□□□ 1.69
C9orf3-209ENST00000460573 KBTBD13C9JR72 458 aa25.61■■□□□ 1.69
C9orf3-209ENST00000460573 DUSP28Q4G0W2 176 aa25.61■■□□□ 1.69
C9orf3-209ENST00000460573 ARRDC4Q8NCT1 418 aa25.61■■□□□ 1.69
C9orf3-209ENST00000460573 CRYGNQ8WXF5 182 aa25.61■■□□□ 1.69
C9orf3-209ENST00000460573 CCDC194A0A1B0GVG4 234 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 MAFGO15525 162 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 RGS20O76081 388 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 TXNP10599 105 aaKnown RBP25.6■■□□□ 1.69
C9orf3-209ENST00000460573 SYN1P17600 705 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 ICAM3P32942 547 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 MNX1P50219 401 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-209ENST00000460573 USP11P51784 963 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 NONOQ15233 471 aaKnown RBP eCLIP25.6■■□□□ 1.69
C9orf3-209ENST00000460573 ANO1Q5XXA6 986 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 GPRASP2Q96D09 838 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 CDHR1Q96JP9 859 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 RTEL1Q9NZ71 1219 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 PCDH10Q9P2E7 1040 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 UBIAD1Q9Y5Z9 338 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 MRVI1Q9Y6F6 885 aa25.6■■□□□ 1.69
C9orf3-209ENST00000460573 TRIOBPQ9H2D6 2365 aa25.59■■□□□ 1.69
C9orf3-209ENST00000460573 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.59■■□□□ 1.69
C9orf3-209ENST00000460573 SMPD1P17405 629 aa25.59■■□□□ 1.69
C9orf3-209ENST00000460573 FOSBP53539 338 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms