RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 SUPT20HL2P0C7V6 817 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 PGM5Q15124 567 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 TMEM240Q5SV17 173 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 RNF20Q5VTR2 975 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 PSRC1Q6PGN9 363 aaPredicted RBP24.17■■□□□ 1.46
SRM-202ENST00000459997 FCHSD1Q86WN1 690 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 PPP1R13LQ8WUF5 828 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 RRP36Q96EU6 259 aaKnown RBP24.17■■□□□ 1.46
SRM-202ENST00000459997 IL23AQ9NPF7 189 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 DDX41Q9UJV9 622 aaKnown RBP24.17■■□□□ 1.46
SRM-202ENST00000459997 COL6A3P12111 3177 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 RXRAP19793 462 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 LIFRP42702 1097 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 CCL23P55773 120 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 CHMP4BP1P59074 171 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 NFRKBQ6P4R8 1299 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 IL31RAQ8NI17 732 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 GUCD1Q96NT3 240 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 LZTS2Q9BRK4 669 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 LRRC2Q9BYS8 371 aa24.16■■□□□ 1.46
SRM-202ENST00000459997 PLEKHA8P1O95397 391 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 CALM1P0DP23 149 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 CALM2P0DP24 149 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 CALM3P0DP25 149 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 CYP2C9P11712 490 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 SMARCA1P28370 1054 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 GNAQP50148 359 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 ZNF365Q70YC5 407 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 VSIG10LQ86VR7 867 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 WNT8AQ9H1J5 351 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 SEC63Q9UGP8 760 aaKnown RBP24.15■■□□□ 1.46
SRM-202ENST00000459997 SLC12A7Q9Y666 1083 aa24.15■■□□□ 1.46
SRM-202ENST00000459997 CCND2P30279 289 aa24.14■■□□□ 1.45
SRM-202ENST00000459997 RAB11FIP4Q86YS3 637 aa24.14■■□□□ 1.45
SRM-202ENST00000459997 EMID1Q96A84 441 aaPredicted RBP24.14■■□□□ 1.45
SRM-202ENST00000459997 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 RGS20O76081 388 aa24.13■■□□□ 1.45
SRM-202ENST00000459997 CASTP20810 708 aaKnown RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 PTPN11Q06124 597 aaPredicted RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 LAMC2Q13753 1193 aa24.13■■□□□ 1.45
SRM-202ENST00000459997 DGKDQ16760 1214 aa24.13■■□□□ 1.45
SRM-202ENST00000459997 DHX37Q8IY37 1157 aaKnown RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 CMTR1Q8N1G2 835 aaKnown RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 SRBD1Q8N5C6 995 aaKnown RBP24.13■■□□□ 1.45
SRM-202ENST00000459997 SEMA6BQ9H3T3 888 aa24.13■■□□□ 1.45
SRM-202ENST00000459997 RASIP1Q5U651 963 aa24.12■■□□□ 1.45
SRM-202ENST00000459997 KCNV1Q6PIU1 500 aa24.12■■□□□ 1.45
SRM-202ENST00000459997 SCLYQ96I15 445 aa24.12■■□□□ 1.45
SRM-202ENST00000459997 ZFP91Q96JP5 570 aaPredicted RBP24.12■■□□□ 1.45
SRM-202ENST00000459997 NEK1Q96PY6 1258 aa24.12■■□□□ 1.45
SRM-202ENST00000459997 TTYH1Q9H313 450 aaPredicted RBP24.12■■□□□ 1.45
SRM-202ENST00000459997 FGBP02675 491 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 SGMS1Q86VZ5 419 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 MICU3Q86XE3 530 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 PPTC7Q8NI37 304 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 SMARCC2Q8TAQ2 1214 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 KAT2BQ92831 832 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 NOD1Q9Y239 953 aa24.11■■□□□ 1.45
SRM-202ENST00000459997 FRMPD4Q14CM0 1322 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 MYH7BA7E2Y1 1941 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 SORBS3O60504 671 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 DNAJB2P25686 324 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 RASEFQ8IZ41 740 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 FANCBQ8NB91 859 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 HERVK_113Q902F9 699 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 CUL5Q93034 780 aa24.1■■□□□ 1.45
SRM-202ENST00000459997 MTIF3Q9H2K0 278 aaKnown RBP24.1■■□□□ 1.45
SRM-202ENST00000459997 GGPS1O95749 300 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 TGFB3P10600 412 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 UBA1P22314 1058 aaKnown RBP24.09■■□□□ 1.45
SRM-202ENST00000459997 CELF3Q5SZQ8 465 aaKnown RBP24.09■■□□□ 1.45
SRM-202ENST00000459997 MYSM1Q5VVJ2 828 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 USP17L6PQ6QN14 398 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 SYNE3Q6ZMZ3 975 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 TMTC3Q6ZXV5 915 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 OTOP2Q7RTS6 562 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 RPUSD2Q8IZ73 545 aaKnown RBP24.09■■□□□ 1.45
SRM-202ENST00000459997 CCDC82Q8N4S0 544 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 SLC17A8Q8NDX2 589 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 GPKOWQ92917 476 aaPredicted RBP eCLIP24.09■■□□□ 1.45
SRM-202ENST00000459997 TCEANC2Q96MN5 208 aa24.09■■□□□ 1.45
SRM-202ENST00000459997 CDX2Q99626 313 aaPredicted RBP24.09■■□□□ 1.45
SRM-202ENST00000459997 TMEM265A0A087WTH1 108 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 ZNF286BP0CG31 522 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 SP2Q02086 613 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 PTGISQ16647 500 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 ADCK5Q3MIX3 580 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 TSGA10IPQ3SY00 556 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 GNPTABQ3T906 1256 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 DHX32Q7L7V1 743 aaKnown RBP24.08■■□□□ 1.45
SRM-202ENST00000459997 SPATA33Q96N06 139 aa24.08■■□□□ 1.45
SRM-202ENST00000459997 CXXC1Q9P0U4 656 aaPredicted RBP24.08■■□□□ 1.45
SRM-202ENST00000459997 TANC1Q9C0D5 1861 aa24.07■■□□□ 1.44
SRM-202ENST00000459997 hCG_1642624A0A1W2PR95 340 aa24.07■■□□□ 1.44
SRM-202ENST00000459997 GRXCR1A8MXD5 290 aa24.07■■□□□ 1.44
SRM-202ENST00000459997 PIK3CDO00329 1044 aa24.07■■□□□ 1.44
SRM-202ENST00000459997 PITPNM1O00562 1244 aa24.07■■□□□ 1.44
SRM-202ENST00000459997 MEIS2O14770 477 aa24.07■■□□□ 1.44
SRM-202ENST00000459997 STAM2O75886 525 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms