RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 NLRC5Q86WI3 1866 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 LCHNA4D1U4 455 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 HSD17B4P51659 736 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 MFAP1P55081 439 aaKnown RBP11.46□□□□□ -0.57
SYN3-205ENST00000459990 CHMP4BP1P59074 171 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 DEFB103AP81534 67 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 GHRHRQ02643 423 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 TFF2Q03403 129 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 PTPN11Q06124 597 aaPredicted RBP11.46□□□□□ -0.57
SYN3-205ENST00000459990 TRAF7Q6Q0C0 670 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 CHST3Q7LGC8 479 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 SESTD1Q86VW0 696 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 MICALL1Q8N3F8 863 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 ADAMTS19Q8TE59 1207 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 ATXN2LQ8WWM7 1075 aaKnown RBP11.46□□□□□ -0.57
SYN3-205ENST00000459990 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
SYN3-205ENST00000459990 MTMR8Q96EF0 704 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 NECAB3Q96P71 396 aaPredicted RBP11.46□□□□□ -0.57
SYN3-205ENST00000459990 RMDN3Q96TC7 470 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 PXMP2Q9NR77 195 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 MAD2L2Q9UI95 211 aa11.46□□□□□ -0.57
SYN3-205ENST00000459990 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.57
SYN3-205ENST00000459990 BRWD1Q9NSI6 2320 aa11.46□□□□□ -0.58
SYN3-205ENST00000459990 TNFRSF10AO00220 468 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 SORBS3O60504 671 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 NBNO60934 754 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 F2P00734 622 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 CFBP00751 764 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 GH1P01241 217 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 PARP1P09874 1014 aaKnown RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 RFC2P35250 354 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 TAP1Q03518 808 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 RBL2Q08999 1139 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 MBTPS1Q14703 1052 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 PTGISQ16647 500 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 IMMTQ16891 758 aaKnown RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 TMEM67Q5HYA8 995 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 FBXO11Q86XK2 927 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 HERC6Q8IVU3 1022 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 GPKOWQ92917 476 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SYN3-205ENST00000459990 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 YTHDC1Q96MU7 727 aaKnown RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 SLC9A7Q96T83 725 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
SYN3-205ENST00000459990 VAT1LQ9HCJ6 419 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 RAPGEFL1Q9UHV5 662 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 MTCH2Q9Y6C9 303 aa11.45□□□□□ -0.58
SYN3-205ENST00000459990 HAS3O00219 553 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 CYTH3O43739 400 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 KPNA6O60684 536 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 LPXNO60711 386 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 KCNQ1P51787 676 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 WDR5P61964 334 aaKnown RBP11.44□□□□□ -0.58
SYN3-205ENST00000459990 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
SYN3-205ENST00000459990 STXBP2Q15833 593 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 BRDTQ58F21 947 aaPredicted RBP11.44□□□□□ -0.58
SYN3-205ENST00000459990 LRRC8DQ7L1W4 858 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 EMID1Q96A84 441 aaPredicted RBP11.44□□□□□ -0.58
SYN3-205ENST00000459990 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
SYN3-205ENST00000459990 PDCD2LQ9BRP1 358 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
SYN3-205ENST00000459990 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 KLRF2D3W0D1 207 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 DHX16O60231 1041 aaKnown RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 CXCL10P02778 98 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 NR3C2P08235 984 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 CYP21A2P08686 494 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 CKBP12277 381 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 ACTN1P12814 892 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 HOXD8P13378 290 aaPredicted RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 UBA1P22314 1058 aaKnown RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 HOXA13P31271 388 aaPredicted RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 PSEN2P49810 448 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 NT5C2P49902 561 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 MRPS5P82675 430 aaKnown RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 SP2Q02086 613 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 PTH1RQ03431 593 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 BFSP2Q13515 415 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 AAMPQ13685 434 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 COL9A3Q14050 684 aaPredicted RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 HSDL1Q3SXM5 330 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 IFIT1BQ5T764 474 aaKnown RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 ARHGEF16Q5VV41 709 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 STOX1Q6ZVD7 989 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 PPTC7Q8NI37 304 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 CAGE1Q8TC20 777 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 PHOSPHO2Q8TCD6 241 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 ARNTL2Q8WYA1 636 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 IWS1Q96ST2 819 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 UHRF1Q96T88 793 aaPredicted RBP11.43□□□□□ -0.58
SYN3-205ENST00000459990 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 OSBPL7Q9BZF2 842 aa11.43□□□□□ -0.58
SYN3-205ENST00000459990 KRT23Q9C075 422 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms