RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 EPB41L2O43491 1005 aaKnown RBP18.6■□□□□ 0.57
COL7A1-203ENST00000459756 CCND2P30279 289 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 PSMC6P62333 389 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 PGM5Q15124 567 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 LY6KQ17RY6 165 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 KCNV1Q6PIU1 500 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 CUL5Q93034 780 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 JAKMIP1Q96N16 626 aaKnown RBP18.6■□□□□ 0.57
COL7A1-203ENST00000459756 RBM28Q9NW13 759 aaKnown RBP18.6■□□□□ 0.57
COL7A1-203ENST00000459756 DDX41Q9UJV9 622 aaKnown RBP18.6■□□□□ 0.57
COL7A1-203ENST00000459756 BRPF3Q9ULD4 1205 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 MRVI1Q9Y6F6 885 aa18.6■□□□□ 0.57
COL7A1-203ENST00000459756 PIK3CDO00329 1044 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 RCAN1P53805 252 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 FGD1P98174 961 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 FPGSQ05932 587 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 ARHGAP1Q07960 439 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 GPR153Q6NV75 609 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 CCDC82Q8N4S0 544 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 EMID1Q96A84 441 aaPredicted RBP18.59■□□□□ 0.57
COL7A1-203ENST00000459756 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 SNX14Q9Y5W7 946 aa18.59■□□□□ 0.57
COL7A1-203ENST00000459756 FRMPD4Q14CM0 1322 aa18.58■□□□□ 0.57
COL7A1-203ENST00000459756 KLF18A0A0U1RQI7 1052 aa18.58■□□□□ 0.56
COL7A1-203ENST00000459756 RTN1Q16799 776 aa18.58■□□□□ 0.56
COL7A1-203ENST00000459756 MFSD5Q6N075 450 aa18.58■□□□□ 0.56
COL7A1-203ENST00000459756 IL31RAQ8NI17 732 aa18.58■□□□□ 0.56
COL7A1-203ENST00000459756 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.56
COL7A1-203ENST00000459756 AFG1LQ8WV93 481 aa18.58■□□□□ 0.56
COL7A1-203ENST00000459756 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-203ENST00000459756 SCN10AQ9Y5Y9 1956 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 STAM2O75886 525 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 RGS20O76081 388 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 MMP3P08254 477 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 TGFB3P10600 412 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 PSMA5P28066 241 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 SHHQ15465 462 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 NFRKBQ6P4R8 1299 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
COL7A1-203ENST00000459756 CNTNAP5Q8WYK1 1306 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 GOLGA8AA7E2F4 631 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 MEIS2O14770 477 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 B4GALT4O60513 344 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 SUPT20HL2P0C7V6 817 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 CPA1P15085 419 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 NBPF20Q3BBV1 942 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 GNPTABQ3T906 1256 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 C9orf50Q5SZB4 431 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 HEATR3Q7Z4Q2 680 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 DHX37Q8IY37 1157 aaKnown RBP18.56■□□□□ 0.56
COL7A1-203ENST00000459756 FBXL16Q8N461 479 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 TMEM199Q8N511 208 aa18.56■□□□□ 0.56
COL7A1-203ENST00000459756 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
COL7A1-203ENST00000459756 RPS6KB1P23443 525 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 EPHB4P54760 987 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 PTPN11Q06124 597 aaPredicted RBP18.55■□□□□ 0.56
COL7A1-203ENST00000459756 FUT2Q10981 343 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 PPIGQ13427 754 aaKnown RBP eCLIP18.55■□□□□ 0.565e-7■■■■■ 28.8
COL7A1-203ENST00000459756 DGKDQ16760 1214 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 XRRA1Q6P2D8 792 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 Q6ZUG5 572 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 PPTC7Q8NI37 304 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 PPP1R12CQ9BZL4 782 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 HIPK3Q9H422 1215 aa18.55■□□□□ 0.56
COL7A1-203ENST00000459756 CCDC196A0A1B0GTZ2 297 aa18.54■□□□□ 0.56
COL7A1-203ENST00000459756 MRPS9P82933 396 aaKnown RBP18.54■□□□□ 0.56
COL7A1-203ENST00000459756 FAM47CQ5HY64 1035 aa18.54■□□□□ 0.56
COL7A1-203ENST00000459756 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
COL7A1-203ENST00000459756 MYSM1Q5VVJ2 828 aa18.54■□□□□ 0.56
COL7A1-203ENST00000459756 PCNX4Q63HM2 1172 aa18.54■□□□□ 0.56
COL7A1-203ENST00000459756 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
COL7A1-203ENST00000459756 INPP4AQ96PE3 977 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-203ENST00000459756 NOC4LQ9BVI4 516 aaKnown RBP18.54■□□□□ 0.56
COL7A1-203ENST00000459756 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-203ENST00000459756 MYH7BA7E2Y1 1941 aa18.54■□□□□ 0.56
COL7A1-203ENST00000459756 UBA1P22314 1058 aaKnown RBP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 ICAM3P32942 547 aa18.53■□□□□ 0.56
COL7A1-203ENST00000459756 CYP2C18P33260 490 aa18.53■□□□□ 0.56
COL7A1-203ENST00000459756 METAP2P50579 478 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 APOBRQ0VD83 1088 aa18.53■□□□□ 0.56
COL7A1-203ENST00000459756 GPKOWQ92917 476 aaPredicted RBP eCLIP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 BRF1Q92994 677 aa18.53■□□□□ 0.56
COL7A1-203ENST00000459756 ZFP91Q96JP5 570 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 RNPC3Q96LT9 517 aaKnown RBP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 USP26Q9BXU7 913 aa18.53■□□□□ 0.56
COL7A1-203ENST00000459756 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
COL7A1-203ENST00000459756 FAM217BQ9NTX9 383 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 TRMT13Q9NUP7 481 aaKnown RBP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 V9GY48 417 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-203ENST00000459756 SPATA31C2B4DYI2 1134 aa18.52■□□□□ 0.56
COL7A1-203ENST00000459756 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
COL7A1-203ENST00000459756 PPFIA4O75335 1185 aa18.52■□□□□ 0.56
COL7A1-203ENST00000459756 GGPS1O95749 300 aa18.52■□□□□ 0.56
COL7A1-203ENST00000459756 HOXD8P13378 290 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms