RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-204ENST00000458188 ADD3Q9UEY8 706 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-204ENST00000458188 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-204ENST00000458188 ZSWIM8A7E2V4 1837 aa9.9□□□□□ -0.82
CLTCL1-204ENST00000458188 COL11A1P12107 1806 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-204ENST00000458188 PARP14Q460N5 1801 aa9.9□□□□□ -0.82
CLTCL1-204ENST00000458188 RPTORQ8N122 1335 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 SMCHD1A6NHR9 2005 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 CEP290O15078 2479 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 ASB14A6NK59 587 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 FAM86B1E9PN63 330 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 TDP2O95551 362 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 GNRH1P01148 92 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 FAM86B2P0C5J1 330 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 U2AF2P26368 475 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 CCND2P30279 289 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 SREBF1P36956 1147 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 TOB1P50616 345 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 STXBP2Q15833 593 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 ANO1Q5XXA6 986 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 VSIG10LQ86VR7 867 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 TRPV1Q8NER1 839 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 BCAS3Q9H6U6 928 aa9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 DIS3Q9Y2L1 958 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-204ENST00000458188 RBBP6Q7Z6E9 1792 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 RGS20O76081 388 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 BRD1O95696 1058 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 F13A1P00488 732 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 ARP10275 920 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 XRCC5P13010 732 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 ITGB5P18084 799 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 EDNRBP24530 442 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 CNGA1P29973 690 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 CCND3P30281 292 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 GRK4P32298 578 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 DDIT3P35638 169 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 ADCYAP1R1P41586 468 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 CACNB2Q08289 660 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 IRF5Q13568 498 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 ACVR2BQ13705 512 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 PRR16Q569H4 304 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 GJC2Q5T442 439 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 MFSD14CQ5VZR4 134 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 PCNX4Q63HM2 1172 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 MAMDC4Q6UXC1 1216 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 COPS5Q92905 334 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 LENG1Q96BZ8 264 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 IWS1Q96ST2 819 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 FTOQ9C0B1 505 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 EHMT1Q9H9B1 1298 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 TFIP11Q9UBB9 837 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 PCDHB6Q9Y5E3 794 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 MRVI1Q9Y6F6 885 aa9.88□□□□□ -0.83
CLTCL1-204ENST00000458188 MKI67P46013 3256 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 H0YGN5 161 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 SLC37A4O43826 429 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 ATP9AO75110 1047 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 EIF3JO75822 258 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 ARIH2O95376 493 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 INHAP05111 366 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 ZNF865P0CJ78 1059 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 PRKAR2AP13861 404 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 MCM7P33993 719 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 MTFR1Q15390 333 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 LY6KQ17RY6 165 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 TTC38Q5R3I4 469 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 OLFML2BQ68BL8 750 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 TAPT1Q6NXT6 567 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 ZNF467Q7Z7K2 595 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 NEK8Q86SG6 692 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 PLA2G4DQ86XP0 818 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 FAM177A1Q8N128 213 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 CRYGNQ8WXF5 182 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 MXRA8Q9BRK3 442 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 MAF1Q9H063 256 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 KATNBL1Q9H079 304 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 CNPY2Q9Y2B0 182 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 TELO2Q9Y4R8 837 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 UBIAD1Q9Y5Z9 338 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 CLIC4Q9Y696 253 aa9.87□□□□□ -0.83
CLTCL1-204ENST00000458188 FRMPD4Q14CM0 1322 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 CUL9Q8IWT3 2517 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 IGLV3-22A0A075B6J6 115 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 B4DLN1 442 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 DDX39AO00148 427 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 ADCY6O43306 1168 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 IGHA2P01877 340 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 HMGCRP04035 888 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 CYP3A4P08684 503 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 USP11P51784 963 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 PRMT2P55345 433 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 SP2Q02086 613 aa9.86□□□□□ -0.83
CLTCL1-204ENST00000458188 SP4Q02446 784 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms