RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
CNOT3-205ENST00000457463 FERMT2Q96AC1 680 aa14.02□□□□□ -0.17
CNOT3-205ENST00000457463 ZMYND12Q9H0C1 365 aa14.02□□□□□ -0.17
CNOT3-205ENST00000457463 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.17
CNOT3-205ENST00000457463 RBM27Q9P2N5 1060 aaKnown RBP14.02□□□□□ -0.17
CNOT3-205ENST00000457463 DNM1LO00429 736 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 C6orf222P0C671 652 aaPredicted RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 MRPL12P52815 198 aaKnown RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 GJA9P57773 515 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 SP2Q02086 613 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 MLLT1Q03111 559 aaPredicted RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 NPY5RQ15761 445 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 LY6KQ17RY6 165 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 DUSP28Q4G0W2 176 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 NECAB2Q7Z6G3 386 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 TLK2Q86UE8 772 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 ANO3Q9BYT9 981 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 C11orf49Q9H6J7 331 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 BCAS3Q9H6U6 928 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 ORC3Q9UBD5 711 aaPredicted RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 DDX41Q9UJV9 622 aaKnown RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
CNOT3-205ENST00000457463 TNRC18O15417 2968 aaPredicted RBP14.01□□□□□ -0.17
CNOT3-205ENST00000457463 STK36Q9NRP7 1315 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 ESYT2A0FGR8 921 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 B4DLN1 442 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 TXNP10599 105 aaKnown RBP14□□□□□ -0.17
CNOT3-205ENST00000457463 CCND2P30279 289 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 FOSBP53539 338 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 SEMA3FQ13275 785 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 ARRDC4Q8NCT1 418 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 SCFD2Q8WU76 684 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 SENP6Q9GZR1 1112 aaPredicted RBP14□□□□□ -0.17
CNOT3-205ENST00000457463 UPF3AQ9H1J1 476 aaKnown RBP14□□□□□ -0.17
CNOT3-205ENST00000457463 C6orf50Q9HD87 102 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 TELO2Q9Y4R8 837 aa14□□□□□ -0.17
CNOT3-205ENST00000457463 EDIL3O43854 480 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 CDKL5O76039 1030 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 ATN1P54259 1190 aaPredicted RBP13.99□□□□□ -0.17
CNOT3-205ENST00000457463 NLRP5P59047 1200 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 TTLL4Q14679 1199 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 KCNA10Q16322 511 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 PCNX4Q63HM2 1172 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 RNF180Q86T96 592 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 CYP2W1Q8TAV3 490 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
CNOT3-205ENST00000457463 ST18O60284 1047 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 ITGB5P18084 799 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 NKX3-2P78367 333 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 ARHGAP1Q07960 439 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 LRRC26Q2I0M4 334 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 GNASQ5JWF2 1037 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 CCDC148Q8NFR7 591 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 CCDC12Q8WUD4 166 aaPredicted RBP13.98□□□□□ -0.17
CNOT3-205ENST00000457463 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
CNOT3-205ENST00000457463 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
CNOT3-205ENST00000457463 ALG1Q9BT22 464 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 PCDHA4Q9UN74 947 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 PHF24Q9UPV7 400 aa13.98□□□□□ -0.17
CNOT3-205ENST00000457463 A0A1W2PQ45 241 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-205ENST00000457463 A0A1W2PQY0 241 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 KBTBD13C9JR72 458 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 M0R2N6 131 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 ATP9AO75110 1047 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 ASGR1P07306 291 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 CAPN2P17655 700 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
CNOT3-205ENST00000457463 CST5P28325 142 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-205ENST00000457463 GNA11P29992 359 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 ACLYP53396 1101 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 AP3B2Q13367 1082 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 FSCN1Q16658 493 aaKnown RBP13.97□□□□□ -0.17
CNOT3-205ENST00000457463 CXCL17Q6UXB2 119 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 REXO1Q8N1G1 1221 aaKnown RBP13.97□□□□□ -0.17
CNOT3-205ENST00000457463 OXER1Q8TDS5 423 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 PPP1R13LQ8WUF5 828 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 CRYGNQ8WXF5 182 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 PHF20Q9BVI0 1012 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 PKD2L1Q9P0L9 805 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 Q9Y3F1 56 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 UBIAD1Q9Y5Z9 338 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
CNOT3-205ENST00000457463 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 FOSP01100 380 aaPredicted RBP13.96□□□□□ -0.17
CNOT3-205ENST00000457463 ICAM3P32942 547 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 SREBF1P36956 1147 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 BLIDQ8IZY5 108 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 AFG1LQ8WV93 481 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 UIMC1Q96RL1 719 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 SPC25Q9HBM1 224 aa13.96□□□□□ -0.17
CNOT3-205ENST00000457463 SH2B1Q9NRF2 756 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms