RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC01546-201ENST00000457435 PCDHB10Q9UN67 800 aa5.56□□□□□ -1.52
LINC01546-201ENST00000457435 TRBV23OR9-2A0A075B6M9 112 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 C7orf72A4D263 438 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 DDX3XO00571 662 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC01546-201ENST00000457435 C6P13671 934 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 GTF2F1P35269 517 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC01546-201ENST00000457435 GJA8P48165 433 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 CCDC81Q6ZN84 652 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 GMLQ99445 158 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 KLHL25Q9H0H3 589 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 MARCH2Q9P0N8 246 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 SHROOM4Q9ULL8 1493 aa5.55□□□□□ -1.52
LINC01546-201ENST00000457435 EPHX1P07099 455 aa5.54□□□□□ -1.52
LINC01546-201ENST00000457435 SLC7A5Q01650 507 aa5.54□□□□□ -1.52
LINC01546-201ENST00000457435 FAM26FQ5R3K3 315 aa5.54□□□□□ -1.52
LINC01546-201ENST00000457435 ZC3H18Q86VM9 953 aaKnown RBP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 DCP2Q8IU60 420 aaKnown RBP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 TXNDC5Q8NBS9 432 aaKnown RBP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 LCORQ96JN0 433 aaPredicted RBP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 SCAND2PQ9GZW5 306 aaPredicted RBP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 CGGBP1Q9UFW8 167 aaPredicted RBP5.54□□□□□ -1.52
LINC01546-201ENST00000457435 SLC12A7Q9Y666 1083 aa5.54□□□□□ -1.52
LINC01546-201ENST00000457435 ATF4P18848 351 aaPredicted RBP5.53□□□□□ -1.52
LINC01546-201ENST00000457435 RASGRP4Q8TDF6 673 aa5.53□□□□□ -1.52
LINC01546-201ENST00000457435 SEC16BQ96JE7 1060 aa5.53□□□□□ -1.52
LINC01546-201ENST00000457435 MRIQ9BWK5 157 aa5.53□□□□□ -1.52
LINC01546-201ENST00000457435 CLEC1BQ9P126 229 aa5.53□□□□□ -1.52
LINC01546-201ENST00000457435 CYP1A1P04798 512 aaPredicted RBP5.52□□□□□ -1.53
LINC01546-201ENST00000457435 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
LINC01546-201ENST00000457435 PLS3P13797 630 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 TACR2P21452 398 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 RBM10P98175 930 aaKnown RBP5.52□□□□□ -1.53
LINC01546-201ENST00000457435 COL9A2Q14055 689 aaPredicted RBP5.52□□□□□ -1.53
LINC01546-201ENST00000457435 PPP2R5EQ16537 467 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 PRAMEF18Q5VWM3 479 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 TEX2Q8IWB9 1127 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 ZFPM1Q8IX07 1006 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 ARHGEF39Q8N4T4 335 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 PLEKHO2Q8TD55 490 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 ARMC5Q96C12 935 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 YIPF4Q9BSR8 244 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
LINC01546-201ENST00000457435 GPRC5CQ9NQ84 441 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 EFR3BQ9Y2G0 817 aa5.52□□□□□ -1.53
LINC01546-201ENST00000457435 LOC105371045A0A1W2PR82 267 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 NPEPPSL1A6NEC2 478 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 C22orf46C9J442 243 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 SGSM2O43147 1006 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 STK10O94804 968 aaKnown RBP5.51□□□□□ -1.53
LINC01546-201ENST00000457435 STAT5AP42229 794 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 NASPP49321 788 aaPredicted RBP5.51□□□□□ -1.53
LINC01546-201ENST00000457435 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
LINC01546-201ENST00000457435 GRB10Q13322 594 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 SURF1Q15526 300 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 MILR1Q7Z6M3 343 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 CPLX3Q8WVH0 158 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 DPF3Q92784 378 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 RCC1LQ96I51 464 aaKnown RBP5.51□□□□□ -1.53
LINC01546-201ENST00000457435 HIRIP3Q9BW71 556 aaPredicted RBP5.51□□□□□ -1.53
LINC01546-201ENST00000457435 DEF6Q9H4E7 631 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 JADE2Q9NQC1 790 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 AKT3Q9Y243 479 aa5.51□□□□□ -1.53
LINC01546-201ENST00000457435 OVOL3O00110 214 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 LAMTOR5O43504 91 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 KCNH1O95259 989 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 THBDP07204 575 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 ITGA1P56199 1179 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 SOGA3Q5TF21 947 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 USP51Q70EK9 711 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 MCF2L2Q86YR7 1114 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 ZNF513Q8N8E2 541 aaPredicted RBP5.5□□□□□ -1.53
LINC01546-201ENST00000457435 DNAJC2Q99543 621 aaKnown RBP5.5□□□□□ -1.53
LINC01546-201ENST00000457435 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
LINC01546-201ENST00000457435 GINM1Q9NU53 330 aa5.5□□□□□ -1.53
LINC01546-201ENST00000457435 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 AMHP03971 560 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 FGRP09769 529 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 NKX3-2P78367 333 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 SCRN1Q12765 414 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 ICAM4Q14773 271 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 MBLAC2Q68D91 279 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 PLEKHH3Q7Z736 793 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 MIB1Q86YT6 1006 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 SEC14L1Q92503 715 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 PPP1R14AQ96A00 147 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 KLC2Q9H0B6 622 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 L2HGDHQ9H9P8 463 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 PPP4R1LQ9P1A2 415 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 STRIP2Q9ULQ0 834 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 TSC22D4Q9Y3Q8 395 aa5.49□□□□□ -1.53
LINC01546-201ENST00000457435 B4GALT3O60512 393 aa5.48□□□□□ -1.53
LINC01546-201ENST00000457435 IL13P35225 146 aa5.48□□□□□ -1.53
LINC01546-201ENST00000457435 KIAA1211LQ6NV74 962 aa5.48□□□□□ -1.53
LINC01546-201ENST00000457435 PALM2Q8IXS6 379 aa5.48□□□□□ -1.53
LINC01546-201ENST00000457435 FAM126BQ8IXS8 530 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms