RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 IRF5Q13568 498 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 CTU1Q7Z7A3 348 aaKnown RBP16.07■□□□□ 0.16
LINC00887-204ENST00000456816 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
LINC00887-204ENST00000456816 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
LINC00887-204ENST00000456816 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 ZHX1Q9UKY1 873 aaPredicted RBP16.07■□□□□ 0.16
LINC00887-204ENST00000456816 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
LINC00887-204ENST00000456816 MARCH6O60337 910 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 EIF3JO75822 258 aaKnown RBP16.06■□□□□ 0.16
LINC00887-204ENST00000456816 STAM2O75886 525 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 CYP3A4P08684 503 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 ELNP15502 786 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
LINC00887-204ENST00000456816 EDNRBP24530 442 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 CYP2C19P33261 490 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 TRAPPC10P48553 1259 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 GNPTABQ3T906 1256 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 PRR16Q569H4 304 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 MAMDC4Q6UXC1 1216 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 SEPT14Q6ZU15 432 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 NLRX1Q86UT6 975 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 FBXO16Q8IX29 292 aaPredicted RBP16.06■□□□□ 0.16
LINC00887-204ENST00000456816 SLAIN1Q8ND83 568 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 TRIB2Q92519 343 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 PTCH2Q9Y6C5 1203 aa16.06■□□□□ 0.16
LINC00887-204ENST00000456816 TDP2O95551 362 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 HMGCRP04035 888 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
LINC00887-204ENST00000456816 MCM7P33993 719 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 ZNF174Q15697 407 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 CEP55Q53EZ4 464 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 PLA2G4DQ86XP0 818 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
LINC00887-204ENST00000456816 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
LINC00887-204ENST00000456816 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 PCNTO95613 3336 aa16.05■□□□□ 0.16
LINC00887-204ENST00000456816 GRK4P32298 578 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 MRPS9P82933 396 aaKnown RBP16.04■□□□□ 0.16
LINC00887-204ENST00000456816 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
LINC00887-204ENST00000456816 MTMR1Q13613 665 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 NBR1Q14596 966 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 MORC4Q8TE76 937 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 MXRA8Q9BRK3 442 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 ABHD16BQ9H3Z7 469 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 PKD2L1Q9P0L9 805 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 UBIAD1Q9Y5Z9 338 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 LCTP09848 1927 aa16.04■□□□□ 0.16
LINC00887-204ENST00000456816 FAM86B1E9PN63 330 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 NEMFO60524 1076 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 SNAI1O95863 264 aaPredicted RBP16.03■□□□□ 0.16
LINC00887-204ENST00000456816 FAM86B2P0C5J1 330 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CNGA1P29973 690 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CIITAP33076 1130 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
LINC00887-204ENST00000456816 ACVR2BQ13705 512 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 PRAMEF19Q5SWL8 479 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 MOXD1Q6UVY6 613 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CYP2W1Q8TAV3 490 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 PXYLP1Q8TE99 480 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CRYGNQ8WXF5 182 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 JADE2Q9NQC1 790 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 CEP131Q9UPN4 1083 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 PCDHB6Q9Y5E3 794 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 ZNFX1Q9P2E3 1918 aaKnown RBP16.03■□□□□ 0.16
LINC00887-204ENST00000456816 PLXNA1Q9UIW2 1896 aa16.03■□□□□ 0.16
LINC00887-204ENST00000456816 FIBPO43427 364 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
LINC00887-204ENST00000456816 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
LINC00887-204ENST00000456816 ITGB5P18084 799 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 TOB1P50616 345 aaPredicted RBP16.02■□□□□ 0.16
LINC00887-204ENST00000456816 PKN2Q16513 984 aaKnown RBP16.02■□□□□ 0.16
LINC00887-204ENST00000456816 SLC9C1Q4G0N8 1177 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 PPP4R3AQ6IN85 833 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 GPRASP2Q96D09 838 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
LINC00887-204ENST00000456816 UIMC1Q96RL1 719 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 TCEAL9Q9UHQ7 104 aa16.02■□□□□ 0.16
LINC00887-204ENST00000456816 CASP8AP2Q9UKL3 1982 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 CYP3A7-CYP3A51PA0A087WV96 503 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 MEIS1O00470 390 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 WNT7AO00755 349 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 SLC37A4O43826 429 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 INHAP05111 366 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 CYP3A7P24462 503 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 TRIM32Q13049 653 aa16.01■□□□□ 0.15
LINC00887-204ENST00000456816 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
LINC00887-204ENST00000456816 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms