RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 NR3C2P08235 984 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 MMP3P08254 477 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 FOSL2P15408 326 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 CHMP4BP1P59074 171 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 WTAPQ15007 396 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 BRDTQ58F21 947 aaPredicted RBP25.28■■□□□ 1.64
SEC22C-213ENST00000456222 RALYLQ86SE5 291 aaKnown RBP25.28■■□□□ 1.64
SEC22C-213ENST00000456222 NCOA7Q8NI08 942 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 IL31RAQ8NI17 732 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 IGDCC4Q8TDY8 1250 aa25.28■■□□□ 1.64
SEC22C-213ENST00000456222 DDX41Q9UJV9 622 aaKnown RBP25.28■■□□□ 1.64
SEC22C-213ENST00000456222 SPTBN5Q9NRC6 3674 aaKnown RBP25.27■■□□□ 1.64
SEC22C-213ENST00000456222 KPNA6O60684 536 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 RGS20O76081 388 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 GH1P01241 217 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 NFRKBQ6P4R8 1299 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 KAT2BQ92831 832 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 ZFP91Q96JP5 570 aaPredicted RBP25.27■■□□□ 1.64
SEC22C-213ENST00000456222 CTAGE1Q96RT6 745 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 PDCD2LQ9BRP1 358 aa25.27■■□□□ 1.64
SEC22C-213ENST00000456222 TRANK1O15050 2925 aa25.26■■□□□ 1.63
SEC22C-213ENST00000456222 EIF3JO75822 258 aaKnown RBP25.26■■□□□ 1.63
SEC22C-213ENST00000456222 SUPT20HL2P0C7V6 817 aa25.26■■□□□ 1.63
SEC22C-213ENST00000456222 TMEM67Q5HYA8 995 aa25.26■■□□□ 1.63
SEC22C-213ENST00000456222 YBX2Q9Y2T7 364 aaKnown RBP25.26■■□□□ 1.63
SEC22C-213ENST00000456222 DEFB128Q7Z7B8 93 aa25.25■■□□□ 1.63
SEC22C-213ENST00000456222 PIBF1Q8WXW3 757 aa25.25■■□□□ 1.63
SEC22C-213ENST00000456222 MYL10Q9BUA6 226 aa25.25■■□□□ 1.63
SEC22C-213ENST00000456222 ERICH2A1L162 156 aa25.24■■□□□ 1.63
SEC22C-213ENST00000456222 SORBS3O60504 671 aa25.24■■□□□ 1.63
SEC22C-213ENST00000456222 MYCLP12524 364 aaPredicted RBP25.24■■□□□ 1.63
SEC22C-213ENST00000456222 USP38Q8NB14 1042 aa25.24■■□□□ 1.63
SEC22C-213ENST00000456222 LSG1Q9H089 658 aaKnown RBP25.24■■□□□ 1.63
SEC22C-213ENST00000456222 LY9Q9HBG7 655 aa25.24■■□□□ 1.63
SEC22C-213ENST00000456222 MRVI1Q9Y6F6 885 aa25.24■■□□□ 1.63
SEC22C-213ENST00000456222 RABGGTBP53611 331 aa25.23■■□□□ 1.63
SEC22C-213ENST00000456222 GDF6Q6KF10 455 aaPredicted RBP25.23■■□□□ 1.63
SEC22C-213ENST00000456222 GPKOWQ92917 476 aaPredicted RBP eCLIP25.23■■□□□ 1.63
SEC22C-213ENST00000456222 NKX2-4Q9H2Z4 354 aa25.23■■□□□ 1.63
SEC22C-213ENST00000456222 PNMA6FA0A0J9YX94 578 aa25.22■■□□□ 1.63
SEC22C-213ENST00000456222 MYOGP15173 224 aa25.22■■□□□ 1.63
SEC22C-213ENST00000456222 PTPN11Q06124 597 aaPredicted RBP25.22■■□□□ 1.63
SEC22C-213ENST00000456222 SART3Q15020 963 aaKnown RBP25.22■■□□□ 1.63
SEC22C-213ENST00000456222 PGM5Q15124 567 aa25.22■■□□□ 1.63
SEC22C-213ENST00000456222 VSIG10LQ86VR7 867 aa25.22■■□□□ 1.63
SEC22C-213ENST00000456222 FCHSD1Q86WN1 690 aa25.22■■□□□ 1.63
SEC22C-213ENST00000456222 RPUSD2Q8IZ73 545 aaKnown RBP25.22■■□□□ 1.63
SEC22C-213ENST00000456222 EMID1Q96A84 441 aaPredicted RBP25.22■■□□□ 1.63
SEC22C-213ENST00000456222 PRDM12Q9H4Q4 367 aa25.22■■□□□ 1.63
SEC22C-213ENST00000456222 DOCK5Q9H7D0 1870 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 TTC28Q96AY4 2481 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 ZNF286BP0CG31 522 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 SP2Q02086 613 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 CATIPQ7Z7H3 387 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 ZNF654Q8IZM8 581 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 DHX38Q92620 1227 aaKnown RBP25.21■■□□□ 1.63
SEC22C-213ENST00000456222 ESYT1Q9BSJ8 1104 aa25.21■■□□□ 1.63
SEC22C-213ENST00000456222 COL25A1Q9BXS0 654 aaPredicted RBP25.21■■□□□ 1.63
SEC22C-213ENST00000456222 MTIF3Q9H2K0 278 aaKnown RBP25.21■■□□□ 1.63
SEC22C-213ENST00000456222 ZBBXA8MT70 800 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 GCOM1H8Y6P7 765 aaPredicted RBP25.2■■□□□ 1.62
SEC22C-213ENST00000456222 IQCF3P0C7M6 154 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 POLR2MP0CAP2 368 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 PTGISQ16647 500 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 BCAS3Q9H6U6 928 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 MAP3K20Q9NYL2 800 aaKnown RBP25.2■■□□□ 1.62
SEC22C-213ENST00000456222 SLC4A7Q9Y6M7 1214 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 PTPRSQ13332 1948 aa25.2■■□□□ 1.62
SEC22C-213ENST00000456222 PITPNM1O00562 1244 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 SLC27A2O14975 620 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 PRC1O43663 620 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 CASTP20810 708 aaKnown RBP25.19■■□□□ 1.62
SEC22C-213ENST00000456222 GPNMBQ14956 572 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 RAB30Q15771 203 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 DGKDQ16760 1214 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 SESTD1Q86VW0 696 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 DHX37Q8IY37 1157 aaKnown RBP25.19■■□□□ 1.62
SEC22C-213ENST00000456222 PPTC7Q8NI37 304 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 HDAC6Q9UBN7 1215 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 MSRAQ9UJ68 235 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 NOD1Q9Y239 953 aa25.19■■□□□ 1.62
SEC22C-213ENST00000456222 PSEN2P49810 448 aa25.18■■□□□ 1.62
SEC22C-213ENST00000456222 LAMC2Q13753 1193 aa25.18■■□□□ 1.62
SEC22C-213ENST00000456222 ADGRE1Q14246 886 aa25.18■■□□□ 1.62
SEC22C-213ENST00000456222 HSDL1Q3SXM5 330 aa25.18■■□□□ 1.62
SEC22C-213ENST00000456222 MYSM1Q5VVJ2 828 aa25.18■■□□□ 1.62
SEC22C-213ENST00000456222 SAMD3Q8N6K7 520 aa25.18■■□□□ 1.62
SEC22C-213ENST00000456222 HAS3O00219 553 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 SH2B2O14492 632 aaPredicted RBP25.17■■□□□ 1.62
SEC22C-213ENST00000456222 PLEKHA8P1O95397 391 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 GGPS1O95749 300 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 F2P00734 622 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 PFKMP08237 780 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 HOXD8P13378 290 aaPredicted RBP25.17■■□□□ 1.62
SEC22C-213ENST00000456222 RXRAP19793 462 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 UBA1P22314 1058 aaKnown RBP25.17■■□□□ 1.62
SEC22C-213ENST00000456222 MRPS9P82933 396 aaKnown RBP25.17■■□□□ 1.62
SEC22C-213ENST00000456222 HIC1Q14526 733 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 CELF3Q5SZQ8 465 aaKnown RBP25.17■■□□□ 1.62
SEC22C-213ENST00000456222 RAB11FIP4Q86YS3 637 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms